Published 2024
| Version v1
Dataset
Open
Vibrio cholerae pathogenicity island 2 encodes two distinct types of restriction systems 2/3
Creators
-
1.
École Polytechnique Fédérale de Lausanne
Description
This dataset is part of the paper "Vibrio cholerae pathogenicity island 2 encodes two distinct types of restriction systems" (Vizzarro et al., 2024). It includes PacBio Single Molecule, Real-Time (SMRT) sequencing performed at the Genomic Technology Facility of the University of Lausanne. In total, 10 strains were sequenced.
The aim of the sequencing was to obtain a comprehensive view of the genomic modifications of a selection of 7PET V. cholerae serogroup isolates. Subsequently, it allowed a comparison between different strains to identify a distinct methylation motif dependent on the Type 1 RM encoded by VPI-2.
The dataset is split into 3 submissions, with the present one being the second of the three (2/3).
Files
1954_demultiplex.bc1040--bc1040.subreadset.xml
Files
(45.0 GB)
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Additional details
Funding
- Howard Hughes Medical Institute
- Internation Research Scholarship 55008726
- Swiss National Science Foundation
- Individual grant 310030_185022