Videos for PolNet GUI

Contains videos to show usage examples of the different scripts of the PolNet GUI. Specifically, for constructing all the input models necesary generating a single synthetic tomogram (400x400x100 voxels with 10 Angstron voxel size) with two different cytosolic macromolecules, a membrane bound one, microtubules and membranes with ellipsoidal shape.

1. create_membrane_models: generates the configuration file of structural model for membranes.
2. create_membrane_models: generates the configuration file of structural model for filaments.
3. atomic_to_density: converts PDB atomic models into density map models for macromolecules.
4. align_membrane_proteins: aligns a density map of a protein with respect to a reference membrane, required for membrane bound proteins.
5. create_macromolecule_models: generates the configuration file of structural model for macromolecules, inclusing membrane bound ones.
6. gen_dataset_and_results: shows a example of selecting the input files and parameters to generate a single synthetic tomogram, it also contain examples of how to visualize the output files.