Published June 30, 2023 | Version v1
Project deliverable Open

Consumer cohort. Integration in the HEAP platform Information Commons (IC) and Data and Feature Warehouse (DFW). Public deliverable 4.3

Contributors

Project leader:

  • 1. ROR icon Karolinska Institutet

Description

The goal of this deliverable was to develop approaches to integrate exposure to nutrients, chemicals, and additives in HEAP’s Information Commons and Knowledge Network.We gained access to the HEAP consortium’s secure GDPR-compliant HPC resources and successfully uploaded the developed purchase data pipeline described within. The pipeline was run in Hopsworks in a manual curated session at the BYOD data meeting (held in November 2022). Hopsworks is working on an R Studio implementation to be run directly from Hopsworks to ensure the pipeline can run on the HEAP platform. The next step is testing the same pipeline in R Studio through Hopsworks, which will be demonstrated during the next BYOD (to be held in late 2024). The pipeline is already available on GitHub and can run outside the Hopsworks environment.

Files

D. 4.3 Integration in IC and DFW.pdf

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Additional details

Related works

Is described by
Publication: 10.1038/s41598-023-47534-6 (DOI)

Funding

European Commission
HEAP - Human Exposome Assessment Platform 874662

Dates

Submitted
2023-06-30