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Published November 28, 2017 | Version v0.1.0
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Pergola: boosting visualization and analysis of longitudinal data by unlocking genomic analysis tools - D. melanogaster behavior dataset obtained with JAABA

  • 1. Center for Genomic Regulation (CRG)

Description

Dataset contains Drosophila melanogaster behavioral annotations of chasing. The dataset is formed by 20 GAL4 line flies group from a TrpA activation screen with increased propensity to chasing and by 19 pBDPGAL4U line (control) flies group. Ctrax motor trajectories derived from the original video-recordings (1000 seconds) were downloaded from this link and used to obtain the chasing behavioral annotations using JAABA 10.1038/nmeth.2281

The data set consist in:

- a "mappings" folder containing all the mappings used by the pergola in the pipeline to convert data.

- a "perframe_TrpA" folder containing mat files with three Ctrax derived variables (dnose2ell, dtheta and velmag) from the motor trajectories of the GAL4 line.

- a "perframe_pBDPGAL4" folder containing mat files with three Ctrax derived variables (dnose2ell, dtheta and velmag) from the motor trajectories of the control line.

- a "scores" folder including the JAABA chasing annotations in two mat file one for each fly line.

Files

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