Published November 28, 2017 | Version 1.0
Software Open

chemotherapy_smac_mimetics_in_CRC_model: Version 1.0

  • 1. Cell Death & Drug Resistance Group, Centre for Cancer Research & Cell Biology, Queen's University Belfast, Belfast, UK;
  • 2. Department of Physiology & Medical Physics, Royal College of Surgeons in Ireland, Dublin 2, Ireland; Centre for Systems Medicine, Royal College of Surgeons in Ireland, Dublin 2, Ireland;
  • 3. Institute of Cell Biology and Immunology, University of Stuttgart, D-70569 Stuttgart, Germany; Stuttgart Research Centre Systems Biology, University of Stuttgart, D-70569 Stuttgart, Germany;
  • 4. Centre for Systems Medicine, Royal College of Surgeons in Ireland, Dublin 2, Ireland;
  • 5. Department of Physiology & Medical Physics, Royal College of Surgeons in Ireland, Dublin 2, Ireland;
  • 6. Department of Physiology & Medical Physics, Royal College of Surgeons in Ireland, Dublin 2, Ireland; Centre for Systems Medicine, Royal College of Surgeons in Ireland, Dublin 2, Ireland; Institute of Cell Biology and Immunology, University of Stuttgart, D-70569 Stuttgart, Germany; Stuttgart Research Centre Systems Biology, University of Stuttgart, D-70569 Stuttgart, Germany;

Description

MATLAB code and experimental datasets for "Simulating and predicting cellular and in vivo responses of colon cancer to combined treatment with chemotherapy and IAP antagonist Birinapant/TL32711".

Output files from the simulations are also provided as MATLAB .mat files in simulation_outputs.zip for convenience.

Notes

Christian T Hellwig and Frank A Lincoln received support from the Irish Research Council (GOIPD/2013/102; GOIPG/2014/1299). Markus Rehm receives further support from the German Research Foundation (FOR2036, MO 3226/1-1).

Files

manuela_s-chemotherapy_smac_mimetics_in_crc_model-2f2361cf8a25.zip

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Additional details

Funding

Development of personalised medicine approaches for the clinical application of IAP antagonists in metastatic and high risk early stage colorectal cancer 14/IA/2582
Science Foundation Ireland
APO-DECIDE – Apoptosis Modelling for Treatment Decisions in Colorectal Cancer 306021
European Commission
BCL-2 family proteins and cellular bioenergetics in the control of cell survival: Towards novel predictive and prognostic markers for disease progression and therapy responses in colorectal cancer patients 13/IA/1881
Science Foundation Ireland