Published February 14, 2024
| Version 1.1.5
Software
Open
CGATOxford/UMI-tools: 1.1.5
Creators
- Tom Smith
- Ian Sudbery1
- Chang Y
- Michael Jackson2
- Peter Chovanec
- Jesse Bloom3
- jz314
- redst4r
- rajivnarayan
- Kohl Kinning4
- cui jie
- Bo Han
- akmorrow13
- Yu Fu5
- Matt Stone6
- Johannes Köster7
- Jan Oppelt8
- James Oguya
- Patrick Roelli
- Elmar Pruesse
- Daniel Liu
- christianbioinf
- Christian Brueffer9
- Avi Srivastava10
- Andreas Heger11
- 1. University of Sheffield
- 2. EPCC, The University of Edinburgh
- 3. Fred Hutchinson Cancer Research Center; Howard Hughes Medical Institute
- 4. University of Colorado Anschutz Medical Campus
- 5. Boston University
- 6. @fulcrumgenomics
- 7. University of Duisburg-Essen
- 8. Platomics
- 9. @insilicoconsulting
- 10. The Wistar Institute
- 11. MRC
Description
New features
- Enables read suffixes to be removed from single end data: @IanSudbery in https://github.com/CGATOxford/UMI-tools/pull/591. See https://github.com/CGATOxford/UMI-tools/issues/580 for motivating issue
- Adds a script to prepare
umi_tools dedup
output for use withRSEM
: @IanSudbery in https://github.com/CGATOxford/UMI-tools/pull/609. See https://github.com/CGATOxford/UMI-tools/issues/465 and https://github.com/CGATOxford/UMI-tools/issues/607 for motivating issues
Bugfix
- Fix lack of help messages in 1.1.4 by @IanSudbery in https://github.com/CGATOxford/UMI-tools/pull/586
- Fixes read suffix line end: @IanSudbery in https://github.com/CGATOxford/UMI-tools/pull/611
Documentation
- Fixed docs for dedup stats filenames: @msto in https://github.com/CGATOxford/UMI-tools/pull/604
New Contributors
- @msto made their first contribution in https://github.com/CGATOxford/UMI-tools/pull/604
Full Changelog: https://github.com/CGATOxford/UMI-tools/compare/1.1.4...1.1.5
Files
CGATOxford/UMI-tools-1.1.5.zip
Files
(16.2 MB)
Name | Size | Download all |
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md5:5814b416832552ad63e8a059ebba7593
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16.2 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/CGATOxford/UMI-tools/tree/1.1.5 (URL)