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Published February 14, 2024 | Version v16.2.0
Software Open

Sage-Bionetworks/Genie: v16.2.0

Description

What's Changed

  • [GEN-973] Fix bed file-clinical file cross-validation by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/540
  • [GEN-977] update annotation-tools version by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/541
  • Update docs by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/542
  • [GEN-1026] Output annotation error report by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/544
  • [GEN-1018] Update main.py and validate.py by @Chelsea-Na in https://github.com/Sage-Bionetworks/Genie/pull/543
  • [GEN-1078] HOTFIX: Add in new known string columns as MSK added new columns into maf file by @thomasyu888 in https://github.com/Sage-Bionetworks/Genie/pull/547
  • [GEN-1027] Store failed annotations error report by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/545
  • [GEN-1076] Exclude genomic_location_explanation from release by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/548
  • [GEN-1028] Generate failed annotations report dashboard by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/546
  • [GEN-974] Allow NaN, nan and NA strings for mutation data by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/549
  • [GEN-1065] Use OIDC with pypi in genie package publishing by @rxu17 in https://github.com/Sage-Bionetworks/Genie/pull/550

New Contributors

  • @Chelsea-Na made their first contribution in https://github.com/Sage-Bionetworks/Genie/pull/543

Full Changelog: https://github.com/Sage-Bionetworks/Genie/compare/v16.1.0...v16.2.0

Files

Sage-Bionetworks/Genie-v16.2.0.zip

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