Published December 12, 2022 | Version v1.1.0
Software Open

MiNAA: Microbiome Network Alignment Algorithm

Contributors

  • 1. ROR icon University of Wisconsin–Madison

Description

MiNAA takes as input a pair of node-edge networks, and finds a correspondance between them such that each node in one is mapped to its most similar node in the other. MiNAA is capable of using both topological (structural) information about the network, and biological information about the taxa each node represents, in order to produce a good approximation of the optimal alignment. Due to the complexity of this task, an approximation is the best that can be done in an efficient runtime. Network alignment in this setting is done primarily for comparative purposes. For example, an alignment might map clusters of taxa to each other, revealing conserved or analogous functions between microbial communities.

Files

minaa-1.1.0.zip

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Additional details

Software

Repository URL
https://github.com/solislemuslab/minaa
Programming language
C++
Development Status
Active