Published February 29, 2024 | Version 1.0.0
Dataset Open

Dataset for "Environmental drivers of increased ecosystem respiration in a warming tundra"

Creators

  • 1. Climate Impacts Research Centre, Department of Ecology and Environmental Science, Umeå University, Abisko, Sweden
  • 2. Department of Spatial Sciences, Faculty of Environmental Sciences, Czech University of Life Sciences Prague, Praha-Suchdol, Czech Republic
  • 3. Water and development research group, Aalto University, Finland
  • 4. Department of Biological Sciences, University of Bergen, Norway
  • 5. Amsterdam Institute for Life and Environment (A-LIFE), Vrije Universiteit, Amsterdam, The Netherlands
  • 6. NORCE Climate and Environment, Norwegian Research Centre AS, Bergen, Norway
  • 7. University of Eastern Finland, Department of Environmental and Biological Sciences, PO Box 1627, 70211 Kuopio, Finland
  • 8. Department of Earth Sciences, University of Gothenburg, SE-405 30 Gothenburg, Sweden
  • 9. Department of Arctic and Marine Biology, Faculty of Biosciences, Fisheries, and Economics, The Arctic University of Norway, Tromsø, Norway
  • 10. Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy
  • 11. Terrestrial Ecology Section, Department of Biology, University of Copenhagen, Denmark
  • 12. Swedish University of Agricultural Sciences, Department of Forest mycology and plant pathology, Uppsala, Sweden
  • 13. Department of Arctic and Marine Biology, UiT – the Arctic University of Norway, N-9037 Tromsø, Norway
  • 14. Center for Permafrost, Department of Geosciences and Natural Resource Management, University of Copenhagen, Denmark
  • 15. Carbone boréal, Département des sciences fondamentales, Université du Québec à Chicoutimi, 555 boulevard de l'Université, Chicoutimi, QC, G7H 2B1, Canada
  • 16. Institute for Environmental Science and Sustainability, Wilkes University, Wilkes-Barre, PA 18766
  • 17. Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Lausanne, Switzerland
  • 18. State Key Laboratory of Grassland Agro-ecosystems, and College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, China
  • 19. Agricultural University of Iceland, Árleyni 22, 112 Reykjavik, Iceland
  • 20. Department of Terrestrial Ecology, Norwegian Institute for Nature Research, Trondheim, Norway
  • 21. The Heathland Centre, Alver, Norway
  • 22. Institute of Ecology, College of Urban and Environmental Sciences, Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing 100871, China
  • 23. Department of Biological Sciences, Dartmouth College, Hanover, NH, USA 03755
  • 24. Biological Sciences, School of Natural Sciences, University of Tasmania, Hobart, Tasmania, Australia
  • 25. University of Iceland, Life and Environmental Sciences, Sturlugata 2, 102 Reykjavík, Iceland
  • 26. Division of Life Sciences, Korea Polar Research Institute, Incheon, South Korea
  • 27. Research Centre for Ecological Change, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki
  • 28. Korea Polar Research Institute, Incheon, Korea
  • 29. "University of Eastern Finland, Department of Environmental and Biological Sciences, PO Box 1627, 70211 Kuopio"
  • 30. ROR icon University Centre in Svalbard
  • 31. Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway
  • 32. NORCE, Norwegian Research Centre AS, Bjerknes Centre for Climate Research, Bergen, Norway
  • 33. "University of Eastern Finland, Department of Environmental and Biological Sciences, PO Box 1627, 70211 Kuopio, Finland"
  • 34. Department of Geography, University of Calgary, Alberta, Canada
  • 35. Arctic Centre, University of Lapland, Rovaniemi, Finland
  • 36. SEGES Innovation P/S, Agro Food Park 15, Aarhus, Denmark
  • 37. Department of Ecology and Environmental Science, Umeå University, Umeå, Sweden
  • 38. Ecological Sciences, The James Hutton Institute, Aberdeen, Scotland, UK AB15 8QH
  • 39. Department of Wildland Resources, Quinney College of Natural Resources and Ecology Center, Utah State University, UT-84322 Logan, Utah, United States of America
  • 40. Greenland Institute of Natural Resources, Nuuk, Greenland
  • 41. Center for Volatile Interactions, Department of Biology, University of Copenhagen, Denmark
  • 42. Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA
  • 43. Department of Ecoscience, Aarhus University, Roskilde, Denmark
  • 44. Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff AZ USA
  • 45. School of Biosciences, University of Nottingham, Sutton Bonington Campus, LE12 5ND, Loughborough, UK
  • 46. Department of Geography and Environmental Management, University of Waterloo, Waterloo, ON, Canada
  • 47. The Ecosystems Center, Marine Biological Laboratory, Woods Hole, Massachusetts
  • 48. Natural Resources Institute Finland
  • 49. Norwegian Institute for Nature Research, Bergen, Norway
  • 50. Ecology and genetics research unit, University of Oulu, Oulu, Finland
  • 51. State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
  • 52. School of Forest Sciences, University of Eastern Finland, Joensuu, Finland
  • 53. Department of Earth Sciences, University of Gothenburg, Box 460, SE-405 30 Gothenburg, Sweden

Description

Data for Nature manuscript titled

“Environmental drivers of increased ecosystem respiration in a warming tundra”

Corresponding author Dr. Sybryn Maes – sybryn.maes@gmail.com

Github contains all R scripts on https://github.com/mjalava/tundraflux

Part A. Meta-analysis

The bold names refer to scripts (see the Github repository https://github.com/mjalava/tundraflux) and names in italics refer to files in this repository

df_0

-Study design Figure 1 and Extended Fig. 1 from main text

df_1a

-Effect size calculations of response (ER)

-Links to df_1.csv file with raw flux and environmental data

-Only the experiments that state ‘Open Access’ in the excel file Authors_Datasets (sheet 2). For experiments stating ‘Available Upon Request’, you need to contact the authors for the -raw flux data.

df_1b

-Effect size calculations of environmental drivers

-Links to df_1.csv file with raw flux data data (see above) and Dataset_ID.csv (this file includes all dataset IDs to merge the drivers into one dataframe)

df_2a-f

-Meta-analysis (2a) and meta-regression models (2b-f) (ER, N=136)

-Links to df_2.csv file with effect size data and context-dependencies and Forestplot_horiz_weights_fig.csv (this file includes the mean pooled Hedges SMD as well as the individual dataset Hedges SMD to plot figure 2)

-Contains code for Figs. 2-4 and Extended Figs 2-3

df_3

-Meta-regression for experimental warming duration

-Contains code for Fig. 5

df_4a           

-Effect size calculations of autotrophic-heterotrophic respiration partitioning (Ra, Rh, N=9)

-Links to df_3.csv file with raw partitioning data of subset experiments (output file df_4.csv)

df_4b           

-Sub-meta-analysis models (ER, Ra, Rh)

-Links to df_4.csv (input file)

NOTES

·       All additional input files for the meta-analysis R-scripts are included within the folders. 

·       ER, Ra, Rh = ecosystem, autotrophic, and heterotrophic respiration

·       N = sample size (number of datasets)

 

Part B. Upscaling results

For upscaling, the input data is described in the code files (see the Github repository) and the accompanying Readme.txt.

percentageChangeResp_tundraAlpine.tif: modelled change in respiration

baseResp_tundraAlpine.tif: baseline respiration (calculated from the data from literature)

modResp_tundraAlpine.tif: modelled respiration after warming (our calculations: (percentageChangeResp_tundraAlpine+1) * baseResp_tundraAlpine)

changeResp_tundraAlpine.tif: modResp-baseResp

standError_tundraAlpine.tif: standard error of modelled respiration (

standError_tundraAlpine_onlyDataUncertainty.tif: standard error of modelled respiration where only data uncertainty is taken into account

Files

baseResp_tundraAlpine.tif

Files (427.6 MB)

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Additional details

Software

Repository URL
https://github.com/mjalava/tundraflux
Programming language
R
Development Status
Active