DT-MODELS
Description
The codes required to reproduce the simulation study and the code required to fit the models to data (Demo example) in: Priyadarshani, D., Huynh, H-D., Altwegg, R., and Hwang, W-H (2024). A unified framework for time-to-detection occupancy and abundance models. Methods in Ecology and Evolution.
Notes
Run the simulation study
Simulation study-MGE_Family.R- is the code file to run the simulation analysis under MGE family
Simulation study-NBN_Family.R- is the code file to run the simulation analysis under NBN family
Run the field study
Field_Analysis.R- is the code for the analysis of Karoo bird data
Field_plots-is the code for the graphs under the Karoo bird data analysis
SumDAIC-Meantimesort.csv-is the summary of the delta AIC sorted by the mean detection times
MGE0_PN1_NBN1_DAIC_1.csv-is the summary of the delta AIC of MGE0, PN1, and NBN1
MGEs_PNs_NBNs_DAIC_1.csv-is the summary of the delta AIC of MGEs, PNs, and the NBNs
MGEc_PNc_NBNc_C.csv-is the summary of the estimated c by the MGEc, PNc, and the NBNc
Run the demo example
RCodeDemoExample.R- is the code required to fit the models to data (a demo example)
DTdat.csv- is the example detection times data to use for the RCodeDemoExample.R
Files
Restricted
The record is publicly accessible, but files are restricted to users with access.