Published June 30, 2014 | Version v1
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Fig. 2. Amino acid sequence alignment and structure predictions for UGT72E, UGT72E3 in Enzymatic and metabolic engineering for efficient production of syringin, sinapyl alcohol 4-O-glucoside, in Arabidopsis thaliana

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Fig. 2. Amino acid sequence alignment and structure predictions for UGT72E, UGT72E3, and their recombinants. (A) Amino acid sequence alignment and secondary structure prediction for UGT72E2 and UGT72E3. Sequence identity (85.7%) is shaded dark gray, and similarity (91.1%) is shaded light gray. The diagnostic PSPG motif of plant family 1 glucosyltransferases is underlined. The exchange site for recombinant UGT72E2/3 and UGT72E3/2 is indicated with an arrowhead. The secondary structures of UGT72E2 and UGT72E3 were predicted using the SWISS-MODEL workspace. The structures are almost identical, but differences are marked with boxes. A β-strand and an oi-helix structure are illustrated by an arrow and a wavy line, respectively. (B) The 3D structures of UGT72E2, UGT72E3 and their recombinant UGTs, UGT72E2/3 and UGT72E3/2, were predicted with the SWISS-MODEL workspace using UGT72B1as a template. Each protein was diagrammed with color-ramped way from the N (blue) to the C terminus (red). Regions where UGT72E2 and UGT72E3 display different secondary structures are indicated.

Notes

Published as part of Chu, Yang, Kwon, Tackmin & Nam, Jaesung, 2014, Enzymatic and metabolic engineering for efficient production of syringin, sinapyl alcohol 4-O-glucoside, in Arabidopsis thaliana, pp. 55-63 in Phytochemistry 102 on page 57, DOI: 10.1016/j.phytochem.2014.03.003, http://zenodo.org/record/10490050

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Journal article: 10.1016/j.phytochem.2014.03.003 (DOI)
Journal article: urn:lsid:plazi.org:pub:886A486CFFA3FF9B9127B2493F37FFBC (LSID)
Journal article: https://zenodo.org/record/10490050 (URL)