biigle/biigle: v1.3.0

Upgrade instructions

In this release the separate vector database is merged into the default database. This requires manual steps to move the feature vectors from one database to the other. For the upgrade, perform the instructions with the additional steps listed below:

• After step 4.2: Do a vector database dump with the command:

   docker exec -i $(docker compose ps -q vector_database) \
       pg_dump --insert --on-conflict-do-nothing --data-only -U biigle -d biigle > biigle_vector_db.sql
  

• After step 6.1: Import the feature vectors into the default database with the command:

  cat biigle_vector_db.sql | docker exec -i $(docker compose ps -q database) psql -U biigle biigle
  

• If everything worked, you can delete the file biigle_vector_db.sql. Also, you can delete the vector database Docker container and Docker volume with the commands:

  docker rm -f biigle-vector_database-1
  docker volume rm biigle_vecdbdata
  

  If the container name differs, look it up in docker ps. If the volume name differs, look it up in docker volume ls.

What's Changed

• Remove separate vector database configuration by @mzur in https://github.com/biigle/biigle/pull/25

Full Changelog: https://github.com/biigle/biigle/compare/v1.2.1...v1.3.0