Towards an EBRAINS service for brain wave analysis: Cobrawap
Creators
- Lupo, Cosimo1
- Bernava, Irene1
- Gutzen, Robin2, 3
- Pastorelli, Elena1
- Capone, Cristiano1, 4
- De Luca, Chiara1, 5, 6
- Cardinale, Alessandra1, 7
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Marmoreo, Federico1
- Allegra Mascaro, Anna Letizia8, 9
- Resta, Francesco8
- Manasanch, Arnau10
- Karvounari, Sofia11
- Mathioulaki, Eleni11
- Pavone, Francesco Saverio8
- Sanchez-Vives, Maria V.10, 12
- Mattia, Maurizio4
- Grün, Sonja2, 3, 13
- Davison, Andrew14
- Paolucci, Pier Stanislao1
- Denker, Michael2, 3
- De Bonis, Giulia1
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1.
Istituto Nazionale di Fisica Nucleare, Sezione di Roma I
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2.
Forschungszentrum Jülich
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3.
Jülich Aachen Research Alliance
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4.
Istituto Superiore di Sanità
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5.
University of Zurich
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6.
ETH Zurich
- 7. Campus Biomedico di Roma
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8.
European Laboratory for Non-Linear Spectroscopy
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9.
National Research Council
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10.
Consorci Institut D'Investigacions Biomediques August Pi I Sunyer
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11.
Athena Research and Innovation Center In Information Communication & Knowledge Technologies
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12.
Institució Catalana de Recerca i Estudis Avançats
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13.
RWTH Aachen University
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14.
Centre National de la Recherche Scientifique
Description
The current variety of data from neuronal recordings, collected with heterogeneous experimental techniques and setups, poses the challenge to consistently compare data across experiments, species, and spatio-temporal scales, and to provide standardized metrics for model validation and calibration. In the context of brain wave analysis, Cobrawap (Collaborative Brain Wave Analysis Pipeline) is a successful tool, built to achieve these goals. Aiming at a wider diffusion and at facilitating the usage of this tool for an extended community of users, we are pointing at providing Cobrawap as a service accessible through the EBRAINS web portal, leveraging computational resources from High-Performance Computing (HPC) platforms belonging to the FENIX-ICEI federation.
Files
LUPO_Cosimo_flash_talk.pdf
Files
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Additional details
Funding
- European Commission
- HBP SGA3 – Human Brain Project Specific Grant Agreement 3 945539
- European Commission
- HBP SGA2 – Human Brain Project Specific Grant Agreement 2 785907
- European Commission
- ICEI – Interactive Computing E-Infrastructure for the Human Brain Project 800858
- European Commission
- EBRAINS-Italy B51E22000150006