Infection Inspection: Classifications and images of ciprofloxacin-treated Escherichia coli clinical isolates

This dataset includes a .csv file with the image metadata and a folder of RGB images of E. coli grown from clinical isolates with varying concentrations of the antibiotic ciprofloxacin and varying minimum inhibitory concentrations. The E. coli cell membranes are stained with Nile Red and the DNA is stained with DAPI. The details of the image data collection are included in: https://doi.org/10.1038/s42003-023-05524-4. The classification data come from a Zooniverse citizen science project, Infection Inspection. (https://www.zooniverse.org/projects/conor-feehily/infection-inspection) Volunteers learned how to interpret ciprofloxacin response phenotypes as antibiotic-sensitive or antibiotic-resistant, and their classifications are included in the Metadata.csv file.

This dataset could be used for further analysis into the volunteer classifications, or the image data could be used for further image feature analysis of the ciprofloxacin response phenotypes.