There is a newer version of the record available.

Published December 4, 2023 | Version v3
Dataset Open

AlphaFold structures with AlphaMissense scores

  • 1. Semmelweis University

Contributors

  • 1. Semmelweis University

Description

These repository provides:

  1. A file including pdb.gz files for human protein structures from the AlphaFoldDb with occupancy and temperature factor columns set to residue-wise mean of  AlphaMissense scores;
  2. A PyMOL plugin file (coloram.py) for coloring these structures;
  3. For data, Python scripts, and notebooks, please refer to the pub.zip file; detailed instructions are provided in the README.md within this archive and further explained in our manuscript.


For alternative data access, please visit https://alphamissense.hegelab.org.

 

Disclaimer: The AlphaMissense Database and other information provided on or linked to this site is for theoretical modelling only, caution should be exercised in use. It is provided "as-is" without any warranty of any kind, whether express or implied. For clarity, no warranty is given that use of the information shall not infringe the rights of any third party (and this disclaimer takes precedence over any contrary provisions in the Google Cloud Platform Terms of Service). The information provided is not intended to be a substitute for professional medical advice, diagnosis, or treatment, and does not constitute medical or other professional advice.

Data contained within the AlphaMissense Database is provided for non-commercial research use only under CC BY-NC-SA 4.0 license.

DeepMind - AlphaMissense: https://doi.org/10.1126/science.adg7492

Files

pub.zip

Files (1.6 GB)

Name Size Download all
md5:4c558e4bef4eb2a7bab906d3fa8664e8
1.5 GB Download
md5:0279534af944c6bf01a19c3ea4a6ad59
905 Bytes Download
md5:c397ddc92207d1ce02bb89eb0eb9acdd
115.9 MB Preview Download