Published November 28, 2023
| Version v2
Dataset
Open
Gene and TE annotation - Merenciano 2023
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1.
Université Claude Bernard Lyon 1
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2.
Universidade Estadual Paulista (Unesp)
Description
Gene and TE annotation for wild-type strains of D. melanogaster and D. simulans.
Both genomes were annotated with liftoff v.1.6.3, parameters -a 0.5 -s 0.75 -exclude_partial. For D. melanogaster, we used reference genome from flybase r6.16; and for D. simulans we used ref genome from flybase r2.02
D. melanogaster Tropical region (São José do Rio Preto - Brazil):
-dmsj23
-dmsj7
D. melanogaster Temperate region (Gotheron - France):
-dmgoth101
-dmgoth63
D. simulans Tropical region (São José do Rio Preto - Brazil):
-dssj9
-dssj27
D. simulans Temperate region (Gotheron - France):
-dsgoth31
-dsgoth613
Files
Files
(873.1 MB)
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