Published April 2, 2024
| Version v1.13.0
Software
Open
scipy/scipy: SciPy 1.13.0
Creators
- Ralf Gommers1
- Pauli Virtanen
- Matt Haberland
- Evgeni Burovski
- Warren Weckesser
- Tyler Reddy2
- Travis E. Oliphant3
- David Cournapeau4
- Andrew Nelson
- alexbrc
- Pamphile Roy
- Pearu Peterson1
- Ilhan Polat5
- Josh Wilson
- endolith
- Nikolay Mayorov
- Stefan van der Walt6
- Matthew Brett7
- Denis Laxalde8
- Eric Larson9
- Atsushi Sakai
- Jarrod Millman10
- Lars
- peterbell101
- CJ Carey11
- Paul van Mulbregt11
- eric-jones
- Nicholas McKibben
- Kai
- Robert Kern12
- 1. Quansight
- 2. LANL
- 3. Quansight, OpenTeams
- 4. Mercari JP
- 5. Sandvik
- 6. University of California, Berkeley
- 7. London Interdisciplinary School
- 8. @dalibo
- 9. University of Washington
- 10. UC Berkeley
- 11. Google
- 12. @enthought
Description
SciPy 1.13.0 Release Notes
SciPy 1.13.0
is the culmination of 3 months of hard work. This
out-of-band release aims to support NumPy 2.0.0
, and is backwards
compatible to NumPy 1.22.4
. The version of OpenBLAS used to build
the PyPI wheels has been increased to 0.3.26.dev
.
This release requires Python 3.9+ and NumPy 1.22.4 or greater.
For running on PyPy, PyPy3 6.0+ is required.
Highlights of this release
- Support for NumPy
2.0.0
. - Interactive examples have been added to the documentation, allowing users to run the examples locally on embedded Jupyterlite notebooks in their browser.
- Preliminary 1D array support for the COO and DOK sparse formats.
- Several
scipy.stats
functions have gained support for additionalaxis
,nan_policy
, andkeepdims
arguments.scipy.stats
also has several performance and accuracy improvements.
New features
scipy.integrate
improvements
- The
terminal
attribute ofscipy.integrate.solve_ivp
events
callables now additionally accepts integer values to specify a number of occurrences required for termination, rather than the previous restriction of only accepting abool
value to terminate on the first registered event.
scipy.io
improvements
scipy.io.wavfile.write
has improveddtype
input validation.
scipy.interpolate
improvements
- The Modified Akima Interpolation has been added to
interpolate.Akima1DInterpolator
, available via the newmethod
argument. - New method
BSpline.insert_knot
inserts a knot into aBSpline
instance. This routine is similar to the module-levelscipy.interpolate.insert
function, and works with the BSpline objects instead oftck
tuples. RegularGridInterpolator
gained the functionality to compute derivatives in place. For instance,RegularGridInterolator((x, y), values, method="cubic")(xi, nu=(1, 1))
evaluates the mixed second derivative, :math:\partial^2 / \partial x \partial y
atxi
.- Performance characteristics of tensor-product spline methods of
RegularGridInterpolator
have been changed: evaluations should be significantly faster, while construction might be slower. If you experience issues with construction times, you may need to experiment with optional keyword argumentssolver
andsolver_args
. Previous behavior (fast construction, slow evaluations) can be obtained via"*_legacy"
methods:method="cubic_legacy"
is exactly equivalent tomethod="cubic"
in previous releases. Seegh-19633
for details.
scipy.signal
improvements
- Many filter design functions now have improved input validation for the
sampling frequency (
fs
).
scipy.sparse
improvements
coo_array
now supports 1D shapes, and has additional 1D support formin
,max
,argmin
, andargmax
. The DOK format now has preliminary 1D support as well, though only supports simple integer indices at the time of writing.- Experimental support has been added for
pydata/sparse
array inputs toscipy.sparse.csgraph
. dok_array
anddok_matrix
now have proper implementations offromkeys
.csr
andcsc
formats now have improvedsetdiag
performance.
scipy.spatial
improvements
voronoi_plot_2d
now draws Voronoi edges to infinity more clearly when the aspect ratio is skewed.
scipy.special
improvements
- All Fortran code, namely,
AMOS
,specfun
, andcdflib
libraries that the majority of special functions depend on, is ported to Cython/C. - The function
factorialk
now also supports faster, approximate calculation usingexact=False
.
scipy.stats
improvements
scipy.stats.rankdata
andscipy.stats.wilcoxon
have been vectorized, improving their performance and the performance of hypothesis tests that depend on them.stats.mannwhitneyu
should now be faster due to a vectorized statistic calculation, improved caching, improved exploitation of symmetry, and a memory reduction.PermutationMethod
support was also added.scipy.stats.mood
now hasnan_policy
andkeepdims
support.scipy.stats.brunnermunzel
now hasaxis
andkeepdims
support.scipy.stats.friedmanchisquare
,scipy.stats.shapiro
,scipy.stats.normaltest
,scipy.stats.skewtest
,scipy.stats.kurtosistest
,scipy.stats.f_oneway
,scipy.stats.alexandergovern
,scipy.stats.combine_pvalues
, andscipy.stats.kstest
have gainedaxis
,nan_policy
andkeepdims
support.scipy.stats.boxcox_normmax
has gained aymax
parameter to allow user specification of the maximum value of the transformed data.scipy.stats.vonmises
pdf
method has been extended to supportkappa=0
. Thefit
method is also more performant due to the use of non-trivial bounds to solve forkappa
.- High order
moment
calculations forscipy.stats.powerlaw
are now more accurate. - The
fit
methods ofscipy.stats.gamma
(withmethod='mm'
) andscipy.stats.loglaplace
are faster and more reliable. scipy.stats.goodness_of_fit
now supports the use of a customstatistic
provided by the user.scipy.stats.wilcoxon
now supportsPermutationMethod
, enabling calculation of accurate p-values in the presence of ties and zeros.scipy.stats.monte_carlo_test
now has improved robustness in the face of numerical noise.scipy.stats.wasserstein_distance_nd
was introduced to compute the Wasserstein-1 distance between two N-D discrete distributions.
Deprecated features
- Complex dtypes in
PchipInterpolator
andAkima1DInterpolator
have been deprecated and will raise an error in SciPy 1.15.0. If you are trying to use the real components of the passed array, usenp.real
ony
.
Backwards incompatible changes
Other changes
- The second argument of
scipy.stats.moment
has been renamed toorder
while maintaining backward compatibility.
Authors
- Name (commits)
- h-vetinari (50)
- acceptacross (1) +
- Petteri Aimonen (1) +
- Francis Allanah (2) +
- Jonas Kock am Brink (1) +
- anupriyakkumari (12) +
- Aman Atman (2) +
- Aaditya Bansal (1) +
- Christoph Baumgarten (2)
- Sebastian Berg (4)
- Nicolas Bloyet (2) +
- Matt Borland (1)
- Jonas Bosse (1) +
- Jake Bowhay (25)
- Matthew Brett (1)
- Dietrich Brunn (7)
- Evgeni Burovski (65)
- Matthias Bussonnier (4)
- Tim Butters (1) +
- Cale (1) +
- CJ Carey (5)
- Thomas A Caswell (1)
- Sean Cheah (44) +
- Lucas Colley (97)
- com3dian (1)
- Gianluca Detommaso (1) +
- Thomas Duvernay (1)
- DWesl (2)
- f380cedric (1) +
- fancidev (13) +
- Daniel Garcia (1) +
- Lukas Geiger (3)
- Ralf Gommers (147)
- Matt Haberland (81)
- Tessa van der Heiden (2) +
- Shawn Hsu (1) +
- inky (3) +
- Jannes Münchmeyer (2) +
- Aditya Vidyadhar Kamath (2) +
- Agriya Khetarpal (1) +
- Andrew Landau (1) +
- Eric Larson (7)
- Zhen-Qi Liu (1) +
- Christian Lorentzen (2)
- Adam Lugowski (4)
- m-maggi (6) +
- Chethin Manage (1) +
- Ben Mares (1)
- Chris Markiewicz (1) +
- Mateusz Sokół (3)
- Daniel McCloy (1) +
- Melissa Weber Mendonça (6)
- Josue Melka (1)
- Michał Górny (4)
- Juan Montesinos (1) +
- Juan F. Montesinos (1) +
- Takumasa Nakamura (1)
- Andrew Nelson (27)
- Praveer Nidamaluri (1)
- Yagiz Olmez (5) +
- Dimitri Papadopoulos Orfanos (1)
- Drew Parsons (1) +
- Tirth Patel (7)
- Pearu Peterson (1)
- Matti Picus (3)
- Rambaud Pierrick (1) +
- Ilhan Polat (30)
- Quentin Barthélemy (1)
- Tyler Reddy (117)
- Pamphile Roy (10)
- Atsushi Sakai (8)
- Daniel Schmitz (10)
- Dan Schult (17)
- Eli Schwartz (4)
- Stefanie Senger (1) +
- Scott Shambaugh (2)
- Kevin Sheppard (2)
- sidsrinivasan (4) +
- Samuel St-Jean (1)
- Albert Steppi (31)
- Adam J. Stewart (4)
- Kai Striega (3)
- Ruikang Sun (1) +
- Mike Taves (1)
- Nicolas Tessore (3)
- Benedict T Thekkel (1) +
- Will Tirone (4)
- Jacob Vanderplas (2)
- Christian Veenhuis (1)
- Isaac Virshup (2)
- Ben Wallace (1) +
- Xuefeng Xu (3)
- Xiao Yuan (5)
- Irwin Zaid (8)
- Elmar Zander (1) +
- Mathias Zechmeister (1) +
A total of 96 people contributed to this release. People with a "+" by their names contributed a patch for the first time. This list of names is automatically generated, and may not be fully complete.
Files
scipy/scipy-v1.13.0.zip
Files
(26.9 MB)
Name | Size | Download all |
---|---|---|
md5:70f2f918de5345ed41b43e6d6c459d0d
|
26.9 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/scipy/scipy/tree/v1.13.0 (URL)