Codebook Motif Explorer Supplementary Dataset
Creators
- 1. IPR RAS
- 2. VIGG RAS
- 3. MLU
- 4. SIB
- 5. FRC ICT
- 6. EPFL
- 7. UToronto
-
8.
Vavilov Institute of General Genetics
Description
This is the supplementary dataset of the GRECO-BIT/Codebook Motif Explorer (MEX),
which is a detailed online catalog of DNA motifs built using a huge collection of experimental data
produced by the Codebook Consortium to annotate the binding specificities of human transcription
factors.
Motif discovery for MEX was performed with multiple software tools, and the resulting motifs were
rigorously benchmarked against held-out test data. Here you can find detailed benchmarking results,
complete motif sets, and the benchmarking-ready preprocessed experimental data.
Further details are provided in README.
*The version update resolves minor file naming issues in the original upload. The files contents remain the same.
Note: There are two extra accompanying Zenodo datasets, namely,
doi:10.5281/zenodo.8327477 (MEX HT-SELEX data) and doi:10.5281/zenodo.8327970 (MEX GHT-SELEX data).
Files
Files
(15.4 GB)
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