Published November 21, 2023
| Version 3.13.2
Software
Open
nf-core/rnaseq: nf-core/rnaseq v3.13.2 - Cobalt Colt
Creators
- Harshil Patel1
- Phil Ewels2
- Alexander Peltzer3
- Olga Botvinnik4
- Jonathan Manning5
- Gregor Sturm3
- Maxime U Garcia6
- Denis Moreno7
- Pranathi Vemuri
- nf-core bot
- silviamorins8
- Lorena Pantano
- Mahesh Binzer-Panchal9
- Matthias Zepper10
- Robert Syme1
- Gavin Kelly11
- Friederike Hanssen12
- Adam Talbot2
- James A. Fellows Yates13
- Chris Cheshire14
- rfenouil
- Jose Espinosa-Carrasco15
- marchoeppner
- Edmund Miller16
- Peng Zhou17
- Sarah Guinchard18
- Gisela Gabernet
- Christian Mertes19
- Daniel Straub12
- Paolo Di Tommaso1
- 1. Seqera Labs
- 2. @seqeralabs
- 3. Boehringer Ingelheim
- 4. @BridgeBioAnalytics
- 5. DeepLife
- 6. @seqeralabs | Stockholm
- 7. Inivata
- 8. @qbicsoftware
- 9. @NBISweden
- 10. @SciLifeLab
- 11. Francis Crick Institute @crickbabs
- 12. QBiC
- 13. HKI Jena, MPI-EVA Leipzig
- 14. The Francis Crick Institute
- 15. CRG
- 16. @Functional-Genomics-Lab
- 17. @maizeumn
- 18. bilille
- 19. TU Munich
Description
What's Changed
- Fix pipeline failure when transcript_fasta not provided and skip_gtf_filter is set to TRUE by @RHReynolds in https://github.com/nf-core/rnaseq/pull/1126
- Enlarge the sampling range for column determination in FilterGTF script. by @MatthiasZepper in https://github.com/nf-core/rnaseq/pull/1127
- Overhaul tximport.r, output length tables by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1123
- Ensure pseudoaligner is set if pseudoalignment is not skipped by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1124
- Dev -> master for 3.13.2 release by @pinin4fjords in https://github.com/nf-core/rnaseq/pull/1128
New Contributors
- @RHReynolds made their first contribution in https://github.com/nf-core/rnaseq/pull/1126
Full Changelog: https://github.com/nf-core/rnaseq/compare/3.13.1...3.13.2
Files
nf-core/rnaseq-3.13.2.zip
Files
(6.1 MB)
| Name | Size | Download all |
|---|---|---|
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md5:eae4fa848c2f5d06c1db847059089a97
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6.1 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/nf-core/rnaseq/tree/3.13.2 (URL)