Published November 10, 2023 | Version v1.1
Model Open

Three Amber-refined models for PDB structure 1wou

Description

Model A. 1wou supercell model after the Amber refinement stage.
Model B. Fully refined 1wou supercell model obtained from the refinement pipeline and consequently reduced to a form of protein bundle.  
Model C. Fully refined 1wou supercell model obtained from the refinement pipeline.

Files

Files (17.9 MB)

Name Size Download all
md5:ed7f97f0647969a817fda3f4c11f2060
8.3 MB Download
md5:067f7d350315833b4c42f127897b6c8f
4.8 MB Download
md5:00a9d3ea34a46a0f61dc85abd1db4736
4.8 MB Download

Additional details

Funding

Russian Science Foundation
Toward better protein structures: combining X-ray diffraction data and MD models of protein crystals 21-44-00033
National Natural Science Foundation of China
Toward better protein structures: combining X-ray diffraction data and MD models of protein crystals 32061133011
St Petersburg University
St. Petersburg University grant Laboratory of Biomolecular NMR 104236506

References

  • O. Mikhailovskii, S.A. Izmailov, Y. Xue, D.A. Case, N.R. Skrynnikov "X-ray crystallography module in MD simulation program Amber 2023. Refining the models of protein crystals" Journal of Chemical Information and Modeling