Published February 25, 2019 | Version v1
Dataset Open

Data and code for: Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5

Description

This dataset contains data and code underlying the comparative genomics, amplicon sequencing, and statistical analysis of the research article "Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5”. Genome sequences and short read datasets are available under NCBI Bioproject accession PRJNA392822.

The dataset contains tar-balls for the main workflows of the analysis. Dowload and unpack to view the contents (tar -zxvf filename.tar.gz). For each tar-ball, a README.txt file describes the contents of the directory. The analyses require certain open-source software packages to be installed. These are not provided here.

Files

ANI_README.txt

Files (884.3 MB)

Name Size Download all
md5:0c32a4e738744b1bad92fb8b30414fe8
15.2 MB Download
md5:0e2a5b4d418330aaf43dba0364795041
407 Bytes Preview Download
md5:17dcbd86de18995b6e036b02a86997d8
709.9 MB Download
md5:4e1a50530fa45c2d475516833e84da65
2.1 kB Preview Download
md5:04081e6c21fa4aeac25387e4b900abe8
6.0 MB Download
md5:dcc92f91d2945453ed588b03fbcc078f
1.6 kB Preview Download
md5:e8f8ae4ce26c5b466875be75de52133e
38.1 MB Download
md5:71104c71c8fe48a437ea5734445c90c4
5.4 kB Preview Download
md5:e6d8c2086a0932a4f17ae0af32c24c3c
91.2 MB Download
md5:2634577653ebbe75d64be787914a45e2
7.8 kB Preview Download
md5:791e5cdea77c9fc98e2edbb8383ff9d2
18.4 MB Download
md5:262c0e156faf47f8c48979998066dd5b
2.3 kB Preview Download
md5:37b57422ae9048ae4fc3c399adeb4f0c
5.6 MB Download
md5:7e311a65b2288833437596bf64227b4b
2.0 kB Preview Download
md5:0b8e275f33d981b124577b50a04b1162
307 Bytes Preview Download
md5:cd4ec48f0851b16557c6d8441eff66a9
3.1 kB Download
md5:eea0be2d2f7591ec541e7313cd2fe7f7
71 Bytes Preview Download

Additional details

Funding

European Commission
MicroBeeOme – Evolution of the honey bee gut microbiome through bacterial diversification 714804