VEBA Test Dataset

# Testing Data

The following fastq files are subsets of the original SRA sequences designed for getting assemblies that have prokaryotic, eukaryotic, and viral genomes.

| id_sample | source_sra  | format | type | num_seqs | min_len | avg_len | max_len | GC(%) |
|-----------|-------------|--------|------|----------|---------|---------|---------|-------|
| S1        | SRR17458614 | FASTQ  | DNA  | 1474203  | 75      | 150.5   | 151     | 46.91 |
| S2        | SRR17458615 | FASTQ  | DNA  | 1638398  | 75      | 150.5   | 151     | 46.92 |
| S3        | SRR17458630 | FASTQ  | DNA  | 2389989  | 75      | 150.4   | 151     | 56.38 |
| S4        | SRR17458638 | FASTQ  | DNA  | 3142566  | 75      | 150.5   | 151     | 46.34 |

Also includes the following: 

• Metagenomic assemblies using metaSPAdes with sorted BAM files from Bowtie2
• Genomes, gene models, etc.
• Taxonomy classifications at the genome and genome cluster level
• Annotations for genes and protein clusters
• Biosynthetic gene clusters
• Clusters for genomes and proteins