Supplementary data files for Sosa-Jiménez et. al. 2023 "A new guest to the blood feast: a novel symbiotic lineage associated with a haematophagous leech from the genus Haementeria"
- 1. University of Vienna
- 2. Instituto de Biología (IB), UNAM
Description
The data set consists of four folders:
1) "COG_profile": COG assignment and count files from running similarity searches between selected genomes.
2) "genome_data": GenBank-formatted annotation file for newly sequenced Pluralibacter haementeriicola endosymbiont, 16S, and ANI identity/score calculation files.
3) "Haementeria_symbionts_orthoMCL": Flat-text output files from the OrthoMCL pipeline ran with Pr. siddallii srain officinalis-GTOCOR2 and Pluralibacter haementeriicola .
4) "phylongeny_data": MrBayes and IQ-TREE2 run/result files for cox1 mitochondrial gene from Hamenteria spp. and all single-copy shated genes among Pl. haementeriicola and an array of selected Enterobacteriaceae and Erwinaceae.
"compressed_dirs.md5sum": md5sums for compressed directory files.
After downloading, check with "$ md5sum -c compressed_dirs.md5sum"
Files
Files
(872.4 MB)
Additional details
Funding
- European Commission
- LEECHSYMBIO – The Mexican leech Haementeria officinalis and its nutritional symbiont as a model system for the study of strict blood-feeding animal-microbe symbioses and bacteriocyte development 840270
- Universidad Nacional Autónoma de México
- Programa de Apoyo a Proyectos de Investigación e Innovación Tecnológica PAPIIT-UNAM-IN213520