Published October 26, 2023 | Version v1
Software Open

Code for results presented in the paper: SHR and SCR coordinate root patterning and growth early in the cell cycle

Authors/Creators

  • 1. ROR icon Duke University
  • 2. ROR icon Howard Hughes Medical Institute
  • 3. ROR icon University of Southern California

Description

zip files for two sets of code:

  1. LSM.zip - Java code for the Root Tracker (control of the light sheet microscope hardware), as well as a ImageJ plugins for image quantification
  2. Mathematica code for trajecotry analysis.zip - Wolfram Mathematica code for trajectory analysis 

Files

LSM.zip

Files (496.4 MB)

Name Size Download all
md5:a407f4ce9fdb93c2b7bd96145328eb12
490.7 MB Preview Download
md5:187e433318796e463f65aa6babe976be
5.7 MB Preview Download

Additional details

Funding

National Institute of Health
NRSA 5F32GM106690-02
National Institute of Health
MIRA 1R35GM131725
Howard Hughes Medical Institute