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Published October 10, 2023 | Version v3
Lesson Open

FAIR Bioinfo - IFB Core Cluster Infrastructure

Creators

  • 1. Sorbonne Université, CNRS, FR2424, ABiMS, Station Biologique, 29680, Roscoff, France
  • 2. IGBMC - Institut de Génétique et de Biologie Moléculaire et Cellulaire

Description

This training material introduce the usage of an HPC infrastructure within the FAIR principe :

  • Introduction about the HPC
  • JupyterHub
  • Demo of notebooks (SLURM, Machine learning, data visualization)
  • Deal about the scientific tools
  • Snakemake within an HPC infrastructure

Files

FAIR Bioinfo 2023 - IFB Core Cluster Infrastructure.pdf

Files (5.1 MB)