Published September 1, 2023 | Version v1
Journal article Restricted

Penicillium thailandense (Aspergillaceae, Eurotiales), a new species isolated from soil in northern Thailand

  • 1. Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & surapongway@gmail.com; https://orcid.org/0000-0003-1999-4001
  • 2. Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & jaturong_yai@hotmail.com; https://orcid.org/0000-0002-3673-6541
  • 3. Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & tanapol.thitla@gmail.com; https://orcid.org/0000-0003-3092-0679
  • 4. Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & sinang333@gmail.com; https://orcid.org/0000-0003-0550-3152
  • 5. Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & Academy of Science, the Royal Society of Thailand, Bangkok, 10300, Thailand & scboi009@gmail.com; https://orcid.org/0000-0002-6485-414X
  • 6. Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand & suwan_461@hotmail.com; https://orcid.org/0000-0002-2653-1913

Description

Khuna, Surapong, Kumla, Jaturong, Thitla, Tanapol, Hongsanan, Sinang, Lumyong, Saisamorn, Suwannarach, Nakarin (2023): Penicillium thailandense (Aspergillaceae, Eurotiales), a new species isolated from soil in northern Thailand. Phytotaxa 612 (1): 33-45, DOI: 10.11646/phytotaxa.612.1.2, URL: http://dx.doi.org/10.11646/phytotaxa.612.1.2

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

LSID
urn:lsid:plazi.org:pub:FFF351585113FFE57843FF96FFDBFFD0
URL
http://publication.plazi.org/id/FFF351585113FFE57843FF96FFDBFFD0

References

  • Ashtekar, N., Rajeshkumar, K.C., Yilmaz, N. & Visagie, C.M. (2022) A new Penicillium section Citrina species and series from India. Mycological Progress 21: 42. https://doi.org/10.1007/s11557-022-01802-3
  • Barbosa, R.N., Bezerra, J.D.P., da Silva Santos, A.C., Melo, R.F.R., Houbraken, J., Oliveira, N.T. & de Souza-Motta, C.M. (2020) Brazilian tropical dry forest (Caatinga) in the spotlight: an overview of species of Aspergillus, Penicillium and Talaromyces (Eurotiales) and the description of P. vascosobrinhous sp. nov. Acta Botanica Brasilica 34: 409-429. https://doi.org/10.1590/0102-33062019abb0411
  • Chanthasena, P., Penkhrue, W., Khowangklang, P., Sritangos, P. & Nantapong, N. (2021) Antimicrobial potential of fungi isolated from soils of dry dipterocarp forest in Northeast Thailand. Chiang Mai Journal of Science 48: 793-807.
  • Coutinho, T.C., Ferreira, M.C., Rosa, L.H., de Oliveira, A.M. & de Oliveira Junior, E.N. (2020) Penicillium citrinum and Penicillium mallochii: New phytopathogens of orange fruit and their control using chitosan. Carbohydrate Polymers 234: 115918. https://doi.org/10.1016/j.carbpol.2020.115918
  • Darriba, D., Taboada, G.L., Doallo, R. & Posada, D. (2012) jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9: 772. https://doi.org/10.1038/nmeth.2109
  • Demjanova, S., Jevinova, P., Pipova, M. & Regecova, I. (2021) Identification of Penicillium verrucosum, Penicillium commune, and Penicillium crustosum isolated from chicken eggs. Processes 9: 53. https://doi.org/10.3390/pr9010053
  • Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792- 1797. https://doi.org/10.1093/nar/gkh340
  • Egbuta, M.A., Mwanza, M. & Babalola, O.O. (2017) Health risks associated with exposure to filamentous fungi. International Journal of Environmental Research and Public Health 14: 719. https://doi.org/10.3390/ijerph14070719
  • Felsenstein, J. (1985) Confidence intervals on phylogenetics: an approach using bootstrap. Evolution 39: 783-791. https://doi.org/10.1111/j.1558-5646.1985.tb00420.x
  • Frisvad, J.C. & Samson, R.A. (2004) Polyphasic taxonomy of Penicillium subgenus Penicillium-A guide to identification of food and air-borne terverticillate Penicillia and their mycotoxins. Studies in Mycology 49: 1-174.
  • Glass, N.L. & Donaldson, G.C. (1995) Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Applied and Environmental Microbiology 61: 1323-1330. https://doi.org/10.1128/aem.61.4.1323-1330.1995
  • Hall, T. (2004) BioEdit. Ibis Therapeutics, Carlsbad, CA, 92008, USA. Available from: http://www.mbio.ncsu.edu/BioEdit/bioedit.html (accessed 15 March 2021)
  • Houbraken, J. & Samson, R.A. (2011) Phylogeny of Penicillium and the segregation of Trichocomaceae into three families. Studies in Mycology 70: 1-51. https://doi.org/10.3114/sim.2011.70.01
  • Houbraken, J., Frisvad, J.C. & Samson, R.A. (2011) Taxonomy of Penicillium section Citrina. Studies in Mycology 70: 53-138. https://doi.org/10.3114/sim.2011.70.02
  • Houbraken, J., Kocsube, S., Visagie, C.M., Yilmaz, N., Wang, X.C., Meijer, M., Kraak, B., Hubka, V., Bensch, K., Samson, R.A. & Frisvad, J.C. (2020) Classification of Aspergillus, Penicillium, Talaromyces and related genera (Eurotiales): an overview of families, genera, subgenera, sections, series and species. Studies in Mycology 95: 5-169. https://doi.org/10.1016/j.simyco.2020.05.002
  • Houbraken, J., Visagie, C.M., Meijer, M., Frisvad, J.C., Busby, P.E., Pitt, J.I., Seifert, K.A., Louis-Seize, G., Demirel, R., Yilmaz, N., Jacobs, K., Christensen, M. & Samson, R.A. (2014) A taxonomic and phylogenetic revision of Penicillium section Aspergilloides. Studies in Mycology 78: 373-451. https://doi.org/10.1016/j.simyco.2014.09.002
  • Houbraken, J.A.M.P., Frisvad, J.C. & Samson, R.A. (2010) Taxonomy of Penicillium citrinum and related species. Fungal Diversity 44: 117-133. https://doi.org/10.1007/s13225-010-0047-z
  • Jeewon, R. & Hyde, K.D. (2016) Establishing species boundaries and new taxa among fungi: Recommendations to resolve taxonomic ambiguities. Mycosphere 7: 1669-1677. https://doi.org/10.5943/mycosphere/7/11/4
  • Jerushalmi, S., Maymon, M., Dombrovsky, A. & Freeman, S. (2020) Fungal pathogens affecting the production and quality of medical cannabis in Israel. Plants 9: 882. https://doi.org/10.3390/plants9070882
  • Khan, I.H. & Javaid, A. (2023) Penicillium citrinum causing postharvest decay on stored garlic cloves in Pakistan. Journal of Plant Pathology 105: 337. https://doi.org/10.1007/s42161-022-01254-4
  • Khuna, S., Suwannarach, N., Kumla, J., Frisvad, J.C., Matsui, K., Nuangmek, W. & Lumyong, S. (2021) Growth enhancement of Arabidopsis (Arabidopsis thaliana) and onion (Allium cepa) with inoculation of three newly identified mineral-solubilizing fungi in the genus Aspergillus section Nigri. Frontiers in Microbiology 12: 705896. https://doi.org/10.3389/fmicb.2021.705896
  • Korhonen, K. & Hintikka, V. (1980) Simple isolation and inoculation methods for fungal cultures. Karstenia 20: 19-22. https://doi.org/10.29203/ka.1980.192
  • Labuda, R., Bacher, M., Rosenau, T., Gasparotto, E., Gratzl, H., Doppler, M., Sulyok, M., Kubatova, A., Berger, H., Cank, K., Raja, H.A., Oberlies, N.H., Schuller, C. & Strauss, J. (2021) Polyphasic approach utilized for the identification of two new toxigenic members of Penicillium section Exilicaulis, P. krskae and P. silybi spp. nov. Journal of Fungi 7: e557. https://doi.org/10.3390/jof7070557
  • Liang, L.-J., Jeewon, R., Dhandevi, P., Durairajan, S.S.K., Li, H., Lin, F.-C. & Wang, H.-K. (2021) A novel species of Penicillium with inhibitory effects against Pyricularia oryzae and fungal pathogens inducing citrus diseases. Frontiers in Cellular and Infection Microbiology 10: 604504. https://doi.org/10.3389/fcimb.2020.604504
  • Link, J.H.F. (1809) Observationes in ordines plantarum naturales. Dissertatio I. Magazin Der Gesellschaft Naturforschenden Freunde Berlin (in Latin) 3: 3-42.
  • Liu, Y.J., Whelen, S. & Hall, B.D. (1999) Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Molecular Biology and Evolution 16: 1799-1808. https://doi.org/10.1093/oxfordjournals.molbev.a026092
  • Mok, T., Koehler, A.P., Yu, M.Y., Ellis, D.H., Johnson, P.J. & Wickham, N.W. (1997) Fatal Penicillium citrinum pneumonia with pericarditis in a patient with acute leukemia. Journal of Clinical Microbiology 35: 2654-2656. https://doi.org/10.1128/jcm.35.10.2654-2656.1997
  • Nguyen, T.T.T., Noh, K.J.K. & Lee, H.B. (2021) New species and eight undescribed species belonging to the families Aspergillaceae and Trichocomaceae in Korea. Mycobiology 49: 534-550. https://doi.org/10.1080/12298093.2021.1997461
  • Nilsson, R.H., Taylor, A.F.S., Adams, R.I., Baschien, C., Johan, B.-P., Cangren, P., Coleine, C., Daniel, H.-M., Glassman, S.I., Hirooka, Y., Irinyi, L., Irdenaite, R., Martin-Sanchez, P.M., Meyer, W., Oh, S.-Y., Sampaio, J.P., Seifert, K.A., Sklenar, F., Stubbe, D., Suh, S.-O., Summerbell, R., Svantesson, S., Unterseher, M., Visagie, C.M., Weiss, M., Woudenberg, J.H.C., Wurzbacher, C., Van den Wyngaert, S., Yilmaz, N., Yurkov, A., Kiljalg, U. & Abarenkov, K. (2018) Taxonomic annotation of public fungal ITS sequences from the built environment - a report from an April 10-11, 2017 workshop (Aberdeen, UK). Mycokeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887
  • Ouhibi, S., Santos, C., Ghali, R., Soares, C., Hedhili, A., Paterson, R. & Lima, N. (2018) Penicillium tunisiense sp. nov., a novel species of Penicillium section Ramosa discovered from Tunisian orchard apples. International Journal of Systematic and Evolutionary Microbiology 68: 3217-3225. https://doi.org/10.1099/ijsem.0.002962
  • Paul, N.C., Park, S., Liu, H., Lee, J.G., Han, G.H., Kim, H. & Sang, H. (2021) Fungi associated with postharvest diseases of sweet potato storage roots and in vitro antagonistic assay of Trichoderma harzianum against the diseases. Journal of Fungi 7: 927. https://doi.org/10.3390/jof7110927
  • Peterson, S.W. (2000) Phylogenetic analysis of Penicillium species based on ITS and LSU-rDNA nucleotide sequences. In: Samson, R.A. & Pitt, J.I. (Eds.) Integration of modern taxonomic methods for Penicillium and Aspergillus classification. Harwood Academic Publishers, Amsterdam, the Netherlands, pp. 163-178.
  • Peterson, S.W., Vega, F.E., Posada, F. & Nagai, C. (2005) Penicillium coffeae, a new endophytic species isolated from a coffee plant and its phylogenetic relationship to P. fellutanum, P. thiersii and P. brocae based on parsimony analysis of multilocus DNA sequences. Mycologia 97: 659-666. https://doi.org/10.1080/15572536.2006.11832796
  • Phookamsak, R., Hyde, K.D., Jeewon, R., Bhat, D.J., Jones, E.B.G., Maharachchikumbura, S.S.N., Raspe, O., Karunarathna, S.C., Wanasinghe, D.N., Hongsanan, S., Doilom, M., Tennakoon, D.S., Machado, A.R., Firmino, A.L., Ghosh, A., Karunarathna, A., Mesic, A., Dutta, A.K., Thongbai, B., Devadatha, B., Norphanphoun, C., Senwanna, C., Wei, D., Pem, D., Ackah, F.K., Wang, G.-N., Jiang, H.-B., Madrid, H., Lee, H.B., Goonasekara, I.D., Manawasinghe, I.S., Kusan, I., Cano, J., Gene, J., Li, J., Das, K., Acharya, K., Raj, K.N.A., Latha, K.P.D., Chethana, K.W.T., He, M.-Q., Duenas, M., Jadan, M., Martin, M.P., Samarakoon, M.C., Dayarathne, M.C., Raza, M., Park, M.S., Telleria, M.T., Chaiwan, N., Matocec, N., de Silva, N.I., Pereira, O.L., Singh, P.N., Manimohan, P., Uniyal, P., Shang, Q.-J., Bhatt, R.P., Perera, R.H., Alvarenga, R.L.M., Nogal-Prata, S., Singh, S.K., Vadthanarat, S., Oh, S.-Y., Huang, S.-K., Rana, S., Konta, S., Paloi, S., Jayasiri, S.C., Jeon, S.J., Mehmood, T., Gibertoni, T.B., Nguyen, T.T.T., Singh, U., Thiyagaraja, V., Sarma, V.V., Dong, W., Yu, X.-D., Lu, Y.-Z., Lim, Y.W., Chen, Y., Tkalcec, Z., Zhang, Z.-F., Luo, Z.-L., Daranagama, D.A., Thambugala, K.M., Tibpromma, S., Camporesi, E., Bulgakov, T.S., Dissanayake, A.J., Senanayake, I.C., Dai, D.Q., Tang, L.- Z., Khan, S., Zhang, H., Promputtha, I., Cai, L., Chomnunti, P., Zhao, R.-L., Lumyong, S., Boonmee, S., Wen, T.-C., Mortimer, P.E. & Xu, J. (2019) Fungal diversity notes 929-1035: taxonomic and phylogenetic contributions on genera and species of fungi. Fungal Diversity 95: 1-273. https://doi.org/10.1007/s13225-019-00421-w
  • Pompranee, P. (2009) Study on soil microorganisms from sugarcane field on sugarcane leaves decomposition. Journal of Science Ladkrabang 18: 42-51. [in Thai]
  • Qin, S., Wang, J., Liu, S., Tang, X., Liu, Z., Liu, R., Wang, Y., Song, L., Chen, X. & Cernava, T. (2023) First report of green mold disease caused by Penicillium citrinum on Dictyophora rubrovolvata in China. Plant Disease 107: 966. https://doi.org/10.1094/PDIS-10-21-2291-PDN
  • Rambaut, A. (2012) FigTree Tree Figure Drawing Tool Version 131, Institute of Evolutionary 623 Biology, University of Edinburgh, Edinburgh, Scotland. Available from: http://tree.bio.ed.ac.uk/software/figtree/ (accessed 29 August 2023)
  • Ronquist, F., Teslenko, M., Van der Mark, P., Ayres, D.L., Darling, A., Hˆ hna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542. https://doi.org/10.1093/sysbio/sys029
  • Saif, F.A., Yaseen, S.A., Alameen, A.S., Mane, S.B. & Undre, P.B. (2020) Identification of Penicillium species of fruits using morphology and spectroscopic methods. Journal of Physics: Conference Series 1644: 012019. https://doi.org/10.1088/1742-6596/1644/1/012019
  • Serra, R., Peterson, S., CTCOR & Venancio, A. (2008) Multilocus sequence identification of Penicillium species in cork bark during plank preparation for the manufacture of stoppers. Research in Microbiology 159: 178-186. https://doi.org/10.1016/j.resmic.2007.12.009
  • Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. https://doi.org/10.1093/bioinformatics/btl446
  • Sun, X., Hu, Y.-H., Wang, J., Fang, C., Li, J., Han, M., Wei, X., Zheng, H., Luo, X., Jia, Y., Gong, M., Xiao, L. & Song, Z. (2021) Efficient and stable metabarcoding sequencing data using a DNBSEQ-G400 sequencer validated by comprehensive community analyses. Gigabyte 2021: 1-15. https://doi.org/10.46471/gigabyte.16
  • Suphaphimol, N., Suwannarach, N., Purahong, W., Jaikang, C., Pengpat, K., Semakul, N., Yimklan, S., Jongjitngam, S., Jindasu, S., Thiangtham, S., Chantawannakul, P. & Disayathanoowat, T. (2022) Identification of microorganisms dwelling on the 19th century Lanna mural paintings from northern Thailand using culture-dependent and -independent approaches. Biology 11: 228. https://doi.org/10.3390/biology11020228
  • Tamura, K., Stecher, G., Petersen, D., Filipsky, A. & Kumar, S. (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular Biology and Evolutionary 30: 2725-2729. https://doi.org/10.1093/molbev/mst197
  • Thom, C. (1910) Cultural studies of species of Penicillium. Bulletin of the Bureau of Animal Industry United States Department of Agriculture 118: 1-109.
  • Torres-Garcia, D., Gene, J. & Garcia, D. (2022) New and interesting species of Penicillium (Eurotiomycetes, Aspergillaceae) in freshwater sediments from Spain. MycoKeys 86: 103-145. https://doi.org/10.3897/mycokeys.86.73861
  • Vetrovsky, T., Morais, D., Kohout, P., Lepinay, C., Algora, C., Awokunle Holla, S., Bahnmann, B.D., Bilohneda, K., Brabcova, V., D'Alo, F., Human, Z.R., Jomura, M., Kolarik, M., Kvasnickova, J., Llado, S., Lopez-Mondejar, R., Martinovic, T., Masinova, T., Meszarosova, L., Michalcikova, L., Michalova, T., Mundra, S., Navratilova, D., Odriozola, I., Piche-Choquette, S., Stursova, M., Svec, K., Tlaskal, V., Urbanova, M., Vlk, L., Voriskova, J., Zifcakova, L. & Baldrian, P. (2020) GlobalFungi, a global database of fungal occurrences from high-throughput-sequencing metabarcoding studies. Scientific Data 7: 228. https://doi.org/10.1038/s41597-020-00647-3
  • Visagie, C.M. & Yilmaz, N. (2023) Along the footpath of Penicillium discovery: six new species from the Woodville Big Tree Forest Trail. Mycologia 115: 87-106. https://doi.org/10.1080/00275514.2022.2135915
  • Visagie, C.M., Houbraken, J., Frisvad, J.C., Hong, S.-B., Klaassen, C.H.W., Perrone, G., Seifert, K.A., Varga, J., Yaguchi, T. & Samson, R.A. (2014b) Identification and nomenclature of the genus Penicillium. Studies in Mycology 78: 343-371. http://dx.doi.org/10.1016/j.simyco.2014.09.001
  • Visagie, C.M., Seifert, K.A., Houbraken, J., Samson, R.A. & Jacobs, K. (2014a) Diversity of Penicillium section Citrina within the fynbos biome of South Africa, including a new species from a Protea repens infructescence. Mycologia 106: 537-552. https://doi.org/10.3852/13-256
  • Visagie, C.M., Seifert, K.A., Houbraken, J., Samson, R.A. & Jacobs, K. (2016) A phylogenetic revision of Penicillium sect. Exilicaulis, including nine new species from fynbos in South Africa. IMA Fungus 7: 75-117. https://doi.org/10.5598/imafungus.2016.07.01.06
  • Vu, D., Groenewald, M., de Vries, M., Gehrmann, T., Stielow, B., Eberhardt, U., Al-Hatmi, A., Groenewald, J.Z., Cardinali, G., Houbraken, J., Boekhout, T., Crous, P.W., Robert, V. & Verkley, G.J.M. (2019) Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation. Studies in Mycology 92: 1-20. https://doi.org/10.1016/j.simyco.2018.05.001
  • Wainwright, B.J., Zahn, G.L., Zushi, J., Lee, N.L.Y., Ooi, J.L.S., Lee, J.N. & Huang, D. (2019) Seagrass-associated fungal communities show distance decay of similarity that has implications for seagrass management and restoration. Ecology and Evolution 9: 11288- 11297. https://doi.org/10.1002/ece3.5631
  • Wang, X.-C., Chen, K., Zeng, Z.-Q. & Zhuang, W.-Y. (2017) Phylogeny and morphological analyses of Penicillium section Sclerotiora (fungi) lead to the discovery of five new species. Scientific Reports 7: 8233. https://doi.org/10.1038/s41598-017-08697-1
  • White, T.J., Bruns, T., Lee, S. & Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J. & Whitish, T.J. (Eds.) PCR Protocols, a Guide to Methods and Applications. Academic Press, San Diego, pp. 315-322. https://doi.org/10.1016/B978-0-12-372180-8.50042-1
  • Wingfield, L.K., Jitprasitporn, N. & Che-alee, N. (2023) Isolation and characterization of halophilic and halotolerant fungi from man-made solar salterns in Pattani Province, Thailand. PLoS One 18: e0281623. https://doi.org/10.1371/journal.pone.0281623
  • Yin, G., Zhang, Y., Pennerman, K.K., Wu, G., Hua, S.S.T., Yu, J., Jurick II, W.M., Guo, A. & Bennett, J.W. (2017) Characterization of blue mold Penicillium species isolated from stored fruits using multiple highly conserved loci. Journal of Fungi 3: e12. https://doi.org/10.3390/jof3010012