Dataset and scripts for "Non-zero temperature study of spin 1/2 charmed baryons using lattice gauge theory"

charmJ12Scripts

A set of scripts and folders to reproduce the analysis and plots in the spin 1/2 charm baryon paper which can be found at [SOON].

This repository includes the raw correlator data, the scripts and software used to analyse them as well as a script which can be run in order to reproduce the entire analysis, and particularly the figures in the manuscript.

correlators

Correlators from openqcd-fastsum-hadspec are zipped in the correlators folder. These are unzipped automatically by the script. The correlators are plain text files.

output

Analysis output is placed here. You do not need to look here in order to see the figures in the paper

code

The python code and scripts that do the analysis. There is some modularity here with the libraries in the lib folder

paperPlots

The plots from the paper will be generated here. They are not supplied with this repo as they can be found in the paper

plotXYData

The x-y and y-error data of each plot in the paper. Only 'scatter' style data is included. This is generated by the run script, but also supplied herein. It will be overwritten by the runscript

run

The folder where the main script needed to run all the analysis is.

Conda Notes

Install your favourite conda solution, such as https://docs.conda.io/en/latest/miniconda.html

Switch to a faster environment solver

This is optional, but likely will solve the dependencies much much faster. See https://www.anaconda.com/blog/a-faster-conda-for-a-growing-community conda update -n base conda conda install -n base conda-libmamba-solver conda config --set solver libmamba

Install Environment

conda env create -f environment.yml

Activate/Use

conda activate charm

Update (w. new packages)

1. Edit environment.yml
2. Deactivate conda environment with conda deactivate
3. Update conda environment with conda env update -f=environment.yml