Published July 21, 2023
| Version 1.1.0
Software
Open
nf-core/raredisease: 1.1.0 - Abu
Creators
- Ramprasad Neethiraj1
- Mei Wu
- Anders Jemt
- Sima Rahimi2
- Gwenna Breton3
- Lucpen
- Lauri Mesilaakso4
- Peter Pruisscher5
- Ryan James Kennedy6
- nf-core bot
- Annick Renevey1
- Subazini TK7
- Halfdan Rydbeck8
- EmmaCAndersson
- Anders Sune Pedersen9
- Lucas Taniguti10
- Marius Bjørnstad
- Emil Bertilsson
- Adam Talbot11
- Maxime U Garcia12
- Phil Ewels11
- Kevin Menden13
- 1. Scilifelab
- 2. Clinical Genomics Gothenburg
- 3. University of Gothenburg
- 4. CTMR/NPC
- 5. Clinical Genomics
- 6. @Clinical-Genomics-Lund
- 7. Oligonovahub
- 8. Linköping university hospital
- 9. Dep. of Molecular Medicine (MOMA)
- 10. @mendelics
- 11. @seqeralabs
- 12. @seqeralabs | Stockholm
- 13. Robert Bosch GmbH
Description
What's Changed
- Annotate small indels with CADD scores by @ramprasadn in https://github.com/nf-core/raredisease/pull/325
- convert bam to cram by @ramprasadn in https://github.com/nf-core/raredisease/pull/340
- Add shiftfasta by @ramprasadn in https://github.com/nf-core/raredisease/pull/354
- feat added MT deletion script by @Lucpen in https://github.com/nf-core/raredisease/pull/349
- Adding upd by @hrydbeck in https://github.com/nf-core/raredisease/pull/364
- Add ek by @Lucpen in https://github.com/nf-core/raredisease/pull/365
- add chromograph by @ramprasadn in https://github.com/nf-core/raredisease/pull/366
- Update to template 2.9 by @ramprasadn in https://github.com/nf-core/raredisease/pull/372
- Avoid publishing uncompressed VCF-file from HMTNOTE_ANNOTATE by @asp8200 in https://github.com/nf-core/raredisease/pull/368
- added check for case id by @EmmaCAndersson in https://github.com/nf-core/raredisease/pull/357
- Gatkcnvcaller by @ramprasadn in https://github.com/nf-core/raredisease/pull/362
- Update schema, output.md, and remove unused parameters by @ramprasadn in https://github.com/nf-core/raredisease/pull/373
- update eklipse by @ramprasadn in https://github.com/nf-core/raredisease/pull/374
- @adamrtalbot made their first contribution in https://github.com/nf-core/raredisease/pull/360
- @hrydbeck made their first contribution in https://github.com/nf-core/raredisease/pull/364
- @asp8200 made their first contribution in https://github.com/nf-core/raredisease/pull/368
- @EmmaCAndersson made their first contribution in https://github.com/nf-core/raredisease/pull/357
Full Changelog: https://github.com/nf-core/raredisease/compare/1.0.0...1.1.0
Files
nf-core/raredisease-1.1.0.zip
Files
(3.4 MB)
| Name | Size | Download all |
|---|---|---|
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md5:202befae6e84b1a73b9bc8ed419609e9
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3.4 MB | Preview Download |
Additional details
Related works
- Is supplement to
- https://github.com/nf-core/raredisease/tree/1.1.0 (URL)