Published July 5, 2023
| Version V1
Journal article
Open
Co-segregation of recombinant chromatids maintains genome-wide heterozygosity in an asexual nematode
Creators
- 1. Laboratory of Biology and Modeling of the Cell, Ecole Normale Supérieure de Lyon, CNRS, Inserm, UCBL, 69007 Lyon, France
- 2. Institut des Sciences de l'Evolution, Université Montpellier, CNRS, Institut de Recherche pour le Développement, 34090 Montpellier, France.
- 3. CNRS, ECOBIO (Ecosystèmes, biodiversité, évolution), University of Rennes 1, UMR 6553, Rennes, France
Description
Recombination rate and heterozygosity computed on 10 populations of Mesorhabditis belari.
SNPs were called with reads2SNP. To phase haplotypes, we first used WhatsHap to extract the phase information contained in reads. Phasing was then completed using Beagle V5.3. Linkage disequilibrium was computed on 5000 pb windows with LDhelmet V1.10 using recommended parameters.
Files
Files
(2.4 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:20ebbe6ab8505434a9207807fafe16b5
|
2.4 GB | Download |
|
md5:63b751f4577e10f7149639d99743b80d
|
1.5 MB | Download |