Published June 13, 2023 | Version A_fumigatus_GEM_NatComm
Software Open

mohammadmirhakkak/A_fumigatus_GEM: A_fumigatus_GEM_NatComm

Creators

  • 1. Hans Knöll Institute

Description

This repository contains the data and scripts (Python and R) that were used in the generation of a pan-genome and 252 A. fumigatus strain genome-scale metabolic models (GEMs) and their interaction simulations with the lung microbiome described by Mirhakkak et al. (2023). Running the scripts in A_fumigatus_GEM/src/ will generate the results in A_fumigatus_GEM/res/.

Files

mohammadmirhakkak/A_fumigatus_GEM-A_fumigatus_GEM_NatComm.zip

Files (7.6 MB)

Additional details

Related works

Is supplement to
https://github.com/mohammadmirhakkak/A_fumigatus_GEM/tree/A_fumigatus_GEM_NatComm (URL)