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Published December 31, 2017 | Version v1
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A review of the taxonomy and osteology of the Rhombophryne serratopalpebrosa species group (Anura: Microhylidae) from Madagascar, with comments on the value of volume rendering of micro-CT data to taxonomists

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Scherz, Mark D., Hawlitschek, Oliver, Andreone, Franco, Rakotoarison, Andolalao, Vences, Miguel, Glaw, Frank (2017): A review of the taxonomy and osteology of the Rhombophryne serratopalpebrosa species group (Anura: Microhylidae) from Madagascar, with comments on the value of volume rendering of micro-CT data to taxonomists. Zootaxa 4273 (3): 301-340, DOI: 10.11646/zootaxa.4273.3.1

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References

  • Andreone, F., Vences, M., Vieites, D.R., Glaw, F. & Meyer, A. (2005) Recurrent ecological adaptations revealed through a molecular analysis of the secretive cophyline frogs of Madagascar. Molecular Phylogenetics and Evolution, 34, 315-322. https://doi.org/10.1016/j.ympev.2004.10.013
  • Blommers-Schlosser, R.M.A. & Blanc, C.P. (1991) Amphibiens (premiere partie). Faune de Madagascar, 75, 1-397.
  • Boettger, O. (1880) Diagnoses reptilium et batrachiorum novorum a Carolo Ebenau in insula Nossi-Be madagascariensi lectorum. Zoologischer Anzeiger, 3, 279-283.
  • Boulenger, G.A. (1882) Catalogue of the Batrachia Salientia s. Caudata in the collection of the British Museum. 2nd Edition. Taylor and Francis, London, xvi + 503 pp.
  • Bruford, M.W., Hanotte, O., Brookefield, J.F.Y. & Burke, T. (1992) Single-locus and multilocus DNA fingerprint. In: Hoelzel, A.R. (Ed.), Molecular Genetic Analysis of Populations: A Practical Approach. IRL Press, Oxford, pp. 225-270.
  • Cope, E.D. (1889) The Batrachia of North America. Bulletin of the United States National Museum, 34, 1-525.
  • Dayrat, B. (2005) Towards integrative taxonomy. Biological Journal of the Linnean Society, 85, 407-415. https://doi.org/10.1111/j.1095-8312.2005.00503.x
  • D'Cruze, N., Kohler, J., Vences, M. & Glaw, F. (2010) A new fat fossorial frog (Microhylidae: Cophylinae: Rhombophryne) from rainforest of the Foret d'Ambre Special Reserve, northern Madagascar. Herpetologica, 66, 182-191. https://doi.org/10.1655/09-008R1.1
  • Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32, 1792-1797.
  • Emerson, S.B. (1979) The ilio-sacral articulation in frogs: form and function. Biological Journal of the Linnean Society, 11, 153-168.
  • https://doi.org/10.1111/j.1095-8312.1979.tb00032.x
  • Fabrezi, M. & Alberch, P. (1996) The carpal elements of anurans. Herpetologica, 52, 188-204.
  • Fonseca, A.A., Cherubini, K., Veeck, E.B., Ladeira, R.S. & Carapeto, L.P. (2008) Effect of 10% formalin on radiographic optical density of bone specimens. Dentomaxillofacial Radiology, 37, 137-141.
  • Frank, N. & Ramus, E. (1995) Complete Guide to Scientific and Common Names of Amphibians and Reptiles of the World. N. G. Publishing Inc., Pottsville, Pennsylvania, 377 pp.
  • Frost, D.R., Grant, T., Faivovich, J., Bain, R.H., Haas, A., Haddad, C.F.B., de Sa, R.O., Channing, A., Wilkinson, M., Donnellan, S.C., Raxworthy, C.J., Campbell, J.A., Blotto, B.L., Moler, P., Drewes, R.C., Nussbaum, R.A., Lynch, J.D., Green, D.M. & Wheeler, W.C. (2006) The Amphibian Tree of Life. Bulletin of the American Museum of Natural History, 297, 1-370.
  • https://doi.org/10.1206/0003-0090(2006)297[0001:TATOL]2.0.CO;2
  • Glaw, F., Kohler, J. & Vences, M. (2010) A new fossorial frog, genus Rhombophryne, from Nosy Mangabe Special Reserve, Madagascar. Zoosystematics and Evolution, 86, 235-243.
  • Glaw, F. & Vences, M. (2007) A Field Guide to the Amphibians and Reptiles of Madagascar. Vences & Glaw Verlags GbR, Koln, 496 pp.
  • Guibe, J. (1974) Batraciens nouveaux de Madagascar. Bulletin du Museum national d'Histoire Naturelle, 3, 1170-1192.
  • Guibe, J. (1975) Batraciens nouveaux de Madagascar. Bulletin du Museum National d'Histoire Naturelle, Paris, Serie 3, Zoologie, 323, 1081-1089.
  • Guibe, J. (1978) Les batraciens de Madagascar. Bonner zoologische Monographien, 11, 1-140.
  • Kohler, J., Vences, M., D'Cruze, N. & Glaw, F. (2010) Giant dwarfs: discovery of a radiation of large-bodied 'stump-toed frogs' from karstic cave environments of northern Madagascar. Journal of Zoology, 282, 21-38. https://doi.org/10.1111/j.1469-7998.2010.00708.x
  • Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Molecular Biology and Evolution, 33, 1870-1874.
  • Lambert, S.M., Hutter, C.R. & Scherz, M.D. (2017) Diamond in the rough: a new species of fossorial diamond frog (Rhombophryne) from Ranomafana National Park, southeastern Madagascar. Zoosystematics and Evolution, 93, 143-155. https://doi.org/10.3897/zse.93.10188
  • Lanfear, R., Calcott, B., Ho, S.Y.W. & Guindon, S. (2012) PartitionFinder: Combined selection of partitioning schemes and substitution models for phylogenetic analyses. Molecular Biology and Evolution, 29, 1695-1701. https://doi.org/10.1093/molbev/mss020
  • Meyer, C., Geller, J. & Paulay, G. (2005) Fine scale endemism on coral reefs: Archipelagic differentiation in turbinid gastropods. Evolution, 59, 113-125.
  • Padial, J.M., Castroviejo-Fisher, S., Kohler, J., Vila, C., Chaparro, J.C. & de la Riva, I. (2008) Deciphering the products of evolution at the species level: the need for an integrative taxonomy. Zoologica Scripta, 38, 431-447. https://doi.org/10.1111/j.1463-6409.2008.00381.x
  • Padial, J.M. & de la Riva, I. (2010) A response to recent proposals for integrative taxonomy. Biological Journal of the Linnean Society, 101, 747-756.
  • https://doi.org/10.1111/j.1095-8312.2010.01528.x
  • Padial, J.M., Miralles, A., De La Riva, I. & Vences, M. (2010) The integrative future of taxonomy. Frontiers in Zoology, 7, 16. https://doi.org/10.1186/1742-9994-7-16
  • Palumbi, S.R., Martin, A., Romano, S., McMillan, W.O., Stice, L. & Grabowski, G. (1991) The simple fool's guide to PCR, Fersion 2.0. Privately published, University of Hawaii.
  • Perl, R.G.B., Nagy, Z.T., Sonet, G., Glaw, F., Wollenberg, K.C. & Vences, M. (2014) DNA barcoding Madagascar's amphibian fauna. Amphibia-Reptilia, 35, 197-206.
  • Rabearivony, J., Rasamoelina, M., Raveloson, J., Rakotomanana, H., Raselimanana, A.P., Raminosoa, N.R. & Zaonarivelo, J.R. (2015) Roles of a forest corridor between Marojejy, Anjanaharibe-Sud and Tsaratanana protected areas, northern Madagascar, in maintaining endemic and threatened Malagasy taxa. Madagascar Conservation & Development, 10, 85- 92.
  • Rabearivony, J., Thorstrom, R., Rene de Roland, A., Rakotondratsima, M., Andriamalala, T.R.A., Sam, T.S., Razafimanjato, G., Rakotondravony, D., Raselimanana, A.P. & Rakotoson, M. (2010) Protected area surface extension in Madagascar: Do endemism and threatened species remain useful criteria for site selection? Madagascar Conservation & Development, 5, 35-47.
  • Rambaut, A. & Drummond, A.J. (2007) Tracer v1.5. Avaliable from: http://beast.bio.ed.ac.uk/Tracer (Accessed 30 May 2017)
  • Raxworthy, C.J. (2008) Global warming and extinction risks for amphibians in Madagascar: a preliminary assessment of upslope displacement. In: Andreone, F. (Ed.), A Conservation Strategy for the Amphibians of Madagascar - Monografie. Museo Regionale di Scienze Naturali, Torino, pp. 67-84.
  • Raxworthy, C.J., Pearson, R.G., Rabibisoa, N., Rakotondrazafy, A.M., Ramanamanjato, J.-B., Raselimanana, A.P., Wu, S., Nussbaum, R.A. & Stone, D.A. (2008) Extinction vulnerability of tropical montane endemism from warming and upslope displacement: a preliminary appraisal for the highest massif in Madagascar. Global Change Biology, 14, 1703-1720. https://doi.org/10.1111/j.1365-2486.2008.01596.x
  • Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Hohna, S., Larget, B., Liu, L., Suchard, M.A. & Huelsenbeck, J.P. (2012) MRBAYES 3.2: Efficient Bayesian phylogenetic inference and model selection across a large model space. Systematic Biology, 61, 539-542.
  • Ruthensteiner, B. & Hess, M. (2008) Embedding 3D models of biological specimens in PDF publications. Microscopy Research and Technique, 71, 778-786.
  • Scherz, M.D., Glaw, F., Vences, M., Andreone, F. & Crottini, A. (2016a) Two new species of terrestrial microhylid frogs (Microhylidae: Cophylinae: Rhombophryne) from northeastern Madagascar. Salamandra, 52, 91-106.
  • Scherz, M.D., Rakotoarison, A., Hawlitschek, O., Vences, M. & Glaw, F. (2015b) Leaping towards a saltatorial lifestyle? An unusually long-legged new species of Rhombophryne (Anura, Microhylidae) from the Sorata massif in northern Madagascar. Zoosystematics and Evolution, 91, 105-114.
  • Scherz, M.D., Ruthensteiner, B., Vences, M. & Glaw, F. (2014) A new microhylid frog, genus Rhombophryne, from northeastern Madagascar, and a re-description of R. serratopalpebrosa using micro-computed tomography. Zootaxa, 3860 (6), 547-560.
  • Scherz, M.D., Ruthensteiner, B., Vieites, D.R., Vences, M. & Glaw, F. (2015a) Two new microhylid frogs of the genus Rhombophryne with superciliary spines from the Tsaratanana Massif in northern Madagascar. Herpetologica, 71, 310- 321.
  • Scherz, M.D., Vences, M., Rakotoarison, A., Andreone, F., Kohler, J., Glaw, F. & Crottini, A. (2016b) Reconciling molecular phylogeny, morphological divergence and classification of Madagascan narrow-mouthed frogs (Amphibia: Microhylidae). Molecular Phylogenetics and Evolution, 100, 372-381.
  • Shen, X.X., Liang, D. & Zhang, P. (2012) The development of three long universal nuclear protein-coding locus markers and their application to osteichthyan phylogenetics with nested PCR. PLoS ONE, 7, e39256. https://doi.org/10.1371/journal.pone.0039256
  • Stuart, S.N., Hoffmann, M., Chanson, J.S., Cox, N.A., Berridge, R.J., Ramani, P. & Young, B.E. (2008) Threatened Amphibians of the World. Lynx Edicions, Barcelona; IUCN, Gland & Conservation International, Arlington, Virginia, 758 pp.
  • Trueb, L. (1968) Cranial osteology of the hylid frog, Smilisca baudini. University of Kansas Publications, Museum of Natural History, 18, 11-35.
  • Trueb, L. (1973) Bones, frogs, and evolution. In: Vial, J.L. (Ed.), Evolutionary biology of the anurans: Contemporary research on major problems. University of Missouri Press, USA, pp. 65-132.
  • Vences, M. & Glaw, F. (2003) New microhylid frog (Plethodontohyla) with a supraocular crest from Madagascar. Copeia, 2003, 789-793.
  • Vences, M., Glaw, F., Kohler, J. & Wollenberg, K.C. (2010) Molecular phylogeny, morphology and bioacoustics reveal five additional species of arboreal microhylid frogs of the genus Anodonthyla from Madagascar. Contributions to Zoology, 79, 1-32.
  • Vences, M., Kosuch, J., Glaw, F., Bohme, W. & Veith, M. (2003) Molecular phylogeny of hyperoliid treefrogs: biogeographic origin of Malagasy and Seychellean taxa and re-analysis of familial paraphyly. Journal of Zoological Systematics and Evolutionary Research, 41, 205-215.
  • https://doi.org/10.1046/j.1439-0469.2003.00205.x
  • Vences, M., Thomas, M., Bonett, R.M. & Vieites, D.R. (2005) Deciphering amphibian diversity through DNA barcoding: chances and challenges. Philosophical Transactions of the Royal Society B, 360, 1859-1868. https://doi.org/10.1098/rstb.2005.1717
  • Vieites, D.R., Wollenberg, K.C., Andreone, F., Kohler, J., Glaw, F. & Vences, M. (2009) Vast underestimation of Madagascar's biodiversity evidenced by an integrative amphibian inventory. Proceedings of the National Academy of Sciences of the United States of America, 106, 8267-8272.
  • Watters, J.L., Cummings, S.T., Flanagan, R.L. & Siler, C.D. (2016) Review of morphometric measurements used in anuran species descriptions and recommendations for a standardized approach. Zootaxa, 4072 (4), 477-495. http://doi.org/10.11646/zootaxa.4072.4.6
  • Wollenberg, K.C., Vieites, D.R., van der Meijden, A., Glaw, F., Cannatella, D.C. & Vences, M. (2008) Patterns of endemism and species richness in Malagasy cophyline frogs support a key role of mountainous areas for speciation. Evolution, 62, 1890-1907.