Published June 7, 2023
| Version 2023.1
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Gut-associated microbes are present and active in the pig nasal cavity
Creators
- 1. 1Unitat Mixta d'Investigació IRTA-UAB en Sanitat Animal, Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra, 08193 Barcelona, Spain. 2IRTA, Programa de Sanitat Animal, Centre de Recerca en Sanitat Animal (CReSA), Campus de la Universitat Autònoma de Barcelona (UAB), Bellaterra, 08193 Barcelona, Spain. 3OIE Collaborating Centre for the Research and Control of Emerging and Re-Emerging Swine Diseases in Europe (IRTA-CReSA), Bellaterra, 08193 Barcelona, Spain.
Description
Qiime2-2022.2 pipeline to process 16S rRNA sequencing samples (DNA and cDNA derived) from the nasal and rectal microbiota of piglets.
See readme.txt to execute the pipeline
Availability of samples and more information about the study: https://www.ncbi.nlm.nih.gov/sra/PRJNA981084
Files
asv-to-exclude-dna.csv
Files
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