Published May 25, 2023
| Version 1.0
Software
Open
emmahodcroft/ncov_2021: Release for manuscript
Creators
- 1. Biozentrum, University of Basel
- 2. @blab @nextstrain
- 3. Fred Hutchinson Cancer Research Center
- 4. University of Pennsylvania
- 5. Westfälische Wilhelms-Universität Münster (University of Muenster)
- 6. PTUK
- 7. London School of Hygiene and Tropical Medicine
Description
This is the version of ncov_2021 used to generate the main Alpha & Delta phylogenies to detect introductions to Switzerland (without the modifications to reduce the background sampling). With the background sampling, the same code was used to produce the 10 re-runs.
Files
emmahodcroft/ncov_2021-1.0.zip
Files
(3.4 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/emmahodcroft/ncov_2021/tree/1.0 (URL)