Published May 2, 2023 | Version v1
Journal article Open

Snapshots from MD simulations of Yarrowia lipolytica complex I with 2Qs

Authors/Creators

  • 1. Djurabekova
  • 2. Nyman
  • 3. Sharma

Description

These are simulation snapshots (.pdb) from classical MD of complex I from Yarrowia lipolytica.

The file names correspond to setups as described in https://doi.org/10.1002/1873-3468.14346

These files can be visualised in software such as VMD or Pymol.

The subunits used in these snapshots:

pfrag 0, chain D, segname APPD
pfrag 1, chain G, segname APPG
pfrag 2, chain 9, segname APP9
pfrag 3, chain W, segname APPW
pfrag 4, chain U, segname APPU
pfrag 5, chain P, segname APAP
pfrag 6, chain H, segname APAH
pfrag 7, chain Z, segname APAZ
pfrag 8, chain F, segname APAF
pfrag 9, chain E, segname APAE
pfrag 10, chain I, segname CHA9
pfrag 11, chain B, segname CHA6
pfrag 12, chain 5, segname CHA5
pfrag 13, chain 4, segname CHA4
pfrag 14, chain 8, segname CHAH
pfrag 15, chain A, segname CHAA
pfrag 16, chain J, segname CHAJ
pfrag 17, chain K, segname CHAK

 

Files

Files (128.4 MB)

Name Size Download all
md5:2de516bb87e440c05c9d6e7bc530c45d
4.0 MB Download
md5:feda061853c6bcc004927085e9384193
41.5 MB Download
md5:59493c267db886aa547c470e4ab8a6da
41.5 MB Download
md5:5cc478add6b0c1a031962fe365d92df7
41.5 MB Download