Published January 1, 2003
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A Molecular Systematic Study of the Lampranthus Group (Aizoaceae) Based on the Chloroplast TrnL-trnF and Nuclear ITS and 5S NTS Sequence Data
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- 1. Bolus Herbarium, University of Cape Town, 7701 Rondebosch, South Africa
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Klak, Cornelia, Hedderson, Terry A., Linder, H. Peter (2003): A Molecular Systematic Study of the Lampranthus Group (Aizoaceae) Based on the Chloroplast TrnL-trnF and Nuclear ITS and 5S NTS Sequence Data. Systematic Botany 28 (1): 70-85, DOI: 10.1043/0363-6445-28.1.70
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- urn:lsid:plazi.org:pub:5A008D578C36CA23FFA7FF9DFFE2273C
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- http://publication.plazi.org/id/5A008D578C36CA23FFA7FF9DFFE2273C
References
- BACKLUND, A. and B. BREMER. 1997. Phylogeny of the Asteridae s. str. based on rbcL sequences, with particular reference to the Dipsacales. Plant Systematics and Evolution 207: 225-254.
- BAKER, W. J., C. B. ASMUSSEN, S. C. BARROW, J. DRANSFIELD, and T. A. HEDDERSON. 1999. A phylogenetic study of the palm familiy (Palmae) based on chloroplast DNA sequences from the trnL -trnF region. Plant Systematics and Evolution 219:11- 126.
- BAKER, W. J., T. A. HEDDERSON, and J. DRANSFIELD. 2000a. Molecular phylogenetics of subfamily Calamoideae (Palmae) based on nrDNA ITS and cpDNA rps16 intron sequence data. Molecular Phylogenetics and Evolution 14: 195-217.
- BAKER, W. J., T. A. HEDDERSON, and J. DRANSFIELD. 2000b. Molecular phylogenetics of Calamus (Palmae) and related rattan genera based on 5S nrDNA spacer sequence data. Molecular Phylogenetics and Evolution 14: 218-231.
- BAKKER, F. T., D. HELLBRUGGE, A. CULHAM, and M. GIBBY. 1998. Phylogenetic relationships within Pelargonium sect. Peristera (Geraniaceae) inferred from nrDNA and cpDNA sequence comparisons. Plant Systematics and Evolution 211: 273-287.
- BITTRICH, V. and H. E. K. HARTMANN. 1988. The Aizoaceae-a new approach. Botanical Journal of the Linnean Society 97: 239- 254.
- BOHLE, U.-R., H. HILGER, R. CERFF, and W. F. MARTIN. 1994. Noncoding chloroplast DNA for plant molecular systematics at the infrageneric level. Pp. 391-403 in Molecular ecology and eVolution: approaches and applications, eds. B. Schierwater, B. Streit, G. P. Wagner and R. DeSalle. Birkhauser, Basel.
- BOLUS, H. M. L. 1928. Notes on Mesembryanthemum and Allied Genera, Part I. Cape Town.
- ---. 1928-1935. Notes on Mesembryanthemum and Allied Genera, Part II. Cape Town.
- ---. 1936-1958. Notes on Mesembryanthemum and Allied Genera, Part III. Cape Town.
- BREMER, B. 1996. Combined and separate analyses of morphological and molecular data in the plant family Rubiaceae. Cladistics 12: 21-40.
- BROWN, N. E. 1921. Mesembryanthemum and some genera separated from it. Gardeners Chronicle 1921: 151-52.
- ---. 1929. New species and critical notes on Mesembryanthemum and allied genera. Bulletin of Miscellaneous Information Kew 2: 56-62.
- BURGOYNE, P. M., G. F. SMITH, and P. CHESSELET. 1998. Hammeria, a new genus of Aizoaceae from South Africa. Journal of the Cactus and Succulent Society of America 70: 203-208.
- CHESSELET, P., G. F. SMITH, P. M. BURGOYNE, C. KLAK, S. A. HAMMER, H. E. K. HARTMANN, H. KURZWEIL, E. J. VAN JAARSVELD, B.-E. VAN WYK, and O. A. LEISTNER. 2000. Mesembryanthemaceae. Strelitzia 10: 360-410.
- COWLING, R. M. and S. PIERCE. 1999: Namaqualand. A Succulent Desert. Fernwood Press.
- COX, A. V., M. D. BENNETT, and T. A. DYER. 1992. Use of the polymerase chain reaction to detect spacer size heterogeneity in plant 5S -rRNA gene clusters and to locate such clusters in wheat (Triticum aestiVum L.). Theoretical and Applied Genetics 83: 684-690.
- DEHN, M. 1992. Untersuchungen zum Verwandtschaftskreis der Ruschiinae, Mesembryanthemaceae Fenzl. Mitteilungen aus dem Institut fur Allgemeine Botanik Hamburg 24: 91-198.
- DOYLE, J. J. 1992. Gene trees and species trees: Molecular systematics as one-character taxonomy. Systematic Botany 17: 144- 163.
- DOYLE, J. J. and J. S. DOYLE. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
- ELDENAS, P., A. A. ANDERBERG, and M. KALLERSJO. 1998. Molecular phylogenetics of the tribe Inuleae s. str. (Asteraceae), based on ITS sequences of nuclear ribosomal DNA.Plant Systematics and Evolution 210: 159-173.
- EMSHWILLER, E. and J. J. DOYLE. 1998. Origins of domestication and polyploidy in oca (Oxalis tuberosa: Oxalidaceae): nrDNA ITS data. American Journal of Botany 85: 975-985.
- FARRIS, J. S. 1969. A successive approximation approach to character weighting. Systematic Zoology 18: 374-385.
- FARRIS, J. S. 1989. The retention index and the rescaled consistency index. Cladistics 5: 417-419.
- FARRIS, J. S., V. A. ALBERT, M. KALLERSJO, D. LIPSCOMB, and A. G. KLUGE. 1996. Parsimony jack-knifing outperforms neighborjoining. Cladistics 12: 99-124.
- GIELLY, L., Y.-M. YUAN, P. KUPFER, and P. TABERLET. 1996. Phylogenetic use of noncoding regions in the genus Gentiana L.: Chloroplast trnL (UAA) intron versus nuclear ribosomal internal transcribed spacer sequences. Molecular Phylogenetics and Evolution 5: 460-466.
- GLEN, H. F. 1978. A taxonomic monograph of Lampranthus and allied genera (Mesembryanthemaceae). Ph.D.-Thesis, University of Cape Town.
- GOLOBOFF, P. A. 1993. Estimating character weights during tree search. Cladistics 9: 83-91.
- HARLEY, E. H. 1997. DAPSA, A Program for DNA And Protein Sequence Analysis, vers. 4.04. Cape Town: Department of Chemical Pathology, University of Cape Town.
- HARTMANN, H. E. K. 1977. Monographie der Gattung Argyroderma N.E.Br. (Mesembryanthemaceae Fenzl.). Mitteilungen aus dem Institut fur Allgemeine Botanik Hamburg 15: 121-235.
- ---. 1979. Surface structures of leaves: their ecological and taxonomical significance in members of the subfamily Ruschioideae Schw. (Mesembryanthemaceae Fenzl). Tropische und Subtropische Pflanzenwelt 28: 31-55.
- ---. 1981. Ecology, distribution and taxonomy in Mesembryanthemaceae as a basis for conservation decisions. Pp. 297-303 in The Biological Aspects of Rare Plant ConserVation, ed. H. Synge. John Wiley & Sons, Chichester.
- ---. 1983. Untersuchungen zum Merkmalsbestand und zur Taxonomie der Subtribus Leipoldtiinae (Mesembryanthemaceae). Bibliotheca Botanica 136: 1-67.
- ---. 1988. Fruit types in Mesembryanthema. Beitrage zur Biologie der Pflanzen 63: 313-349.
- ---. 1989. Monographien der Subtribus Leipoldttiinae. VIII. Monographie der Gattung Cephalophyllum (Mesembryanthemaceae). Mitteilungen aus dem Institut fur Allgemeine Botanik Hamburg 22: 93-187.
- ---. 1991. Mesembryanthema. Contributions from the Bolus Herbarium 13: 75-157.
- ---. 1993. Aizoaceae. Pp. 37-69 in The Families and Genera of Vascular Plants 2, eds. K. Kubitzki, J. G. Rohwer, V. Bittrich. Berlin: Springer Verlag.
- ---. 1996. Miscellaneous taxonomic notes on Aizoaceae. Bradleya 14: 29-56.
- ---. 1998a. New combinations in Ruschioideae, based on studies in Ruschia (Aizoaceae). Bradleya 16: 44-91.
- ---. 1998b. Groupings in Ruschioideae (Aizoaceae). Mesemb Study Group Bulletin 13: 35-36.
- ---. 1998c. New combinations in Antimima (Ruschioideae, Aizoaceae) from southern Africa. Bothalia 28, 1: 67-82.
- ---. 1999. An annotated list of the species placed in Ruschia (Aizoaceae). Bradleya 17: 38-74.
- ---. 2001. Lampranthus N.E.Br. Pp. 75-108 in Illustrated Handbook of Succulent Plants. Aizoaceae F-Z. Springer.
- --- and C. BRUCKMANN. 2000. The capsules of Drosanthemum Schwantes (Ruschioideae, Aizoaceae). Bradleya 18: 75-112.
- ---. 1960. Entwicklungsgeschichtliche, morphologische und systematische Untersuchungen an Mesembryanthemen. Feddes Repertorium specierum novarum regni vegetabilis 63: 1- 104.
- ---. 1971a. Uber ontogenetische Abbreviation und Zeitkorrelationsanderungen und ihre Bedeutung fur Morphologie und Sytematik. Bericht der Deutschen Botanischen Gesellschaft 84: 91-107.
- ---. 1971b. Zur Morpholgie und Taxonomie der Mitrophyllinae Schwantes (Mesembryanthemaceae). Bericht der Deutschen Botanischen Gesellschaft 84: 655-60.
- ---. 1971c. Some aspects of the biology of dissemination of the Mesembryanthemaceae. Pp. 28-34 in The Genera of the Mesembryanthemaceae, ed. H. Herre. Tafelberg, Cape Town.
- ---. 1975. Some trends in the evolution of Mesembryanthemaceae. Boissiera 24: 249-54.
- ---. 1985. Lebensformen und Uberlebensstrategien bei Sukkulenten. Bericht der Deutschen Botanischen Gesellschaft 98: 409-423.
- ---. 1994. Diversification in an arid world: The Mesembryanthemaceae. Annual Review of Ecology and Systematics 25: 521-46.
- ---. 1997. The systematic position of the genus Drosanthemopsis Rauschert and a revision of the genus Jacobsenia L. Bolus & Schwantes (Mesembryanthemaceae). Mitteilungen aus dem Institut fur Allgemeine Botanik Hamburg 27: 109-126.
- --- and N. JURGENS. 1982. Epidermistypen mit reduzierten Blasenzell-Idioblasten bei Mesembryanthemaceae. Mitteilungen aus dem Institut fur Allgemeine Botanik Hamburg 18: 103-115.
- JURGENS, N. 1985. Konvergente Evolution von Blatt- und Epidermismerkmalen bei blattsukkulenten Familien. Bericht der Deutschen Botanischen Gesellschaft 98: 425-446.
- ---. 1986. Untersuchungen zur Okologie sukkulenter Pflanzen des sudlichen Africa. Mitteilungen aus dem Institut fur Allgemeine Botanik Hamburg 21: 139-365. KELLOGG, E. A., R. APPLES, and R. G. MASON- GAMER. 1996. Why genes tell different stories: The diploid genera of Triticeae (Gramineae). Systematic Botany 21: 321-347.
- KIM, J. H., H. 'T HART, and T. H. M. MES. 1996. The phylogenetic position of East Asian Sedum species (Crassulaceae) based on chloroplast DNA trnL (UAA)-trnF (GAA) intergenic spacer sequence variation. Acta Botanica Neerlandica 45: 309-321.
- KIM, S.-C., D. J. CRAWFORD, M. TADESSE, M. BERBEE, F. R. GANDERS, M. PIRSEYEDI, and E. J. ESSELMAN. 1999. A molecular phylogeny of Apiaceae tribe Caucalideae and related taxa: Inferences based on ITS sequence data. Systematic Botany 24: 480-493.
- KLAK, C. 2000. Taxonomic studies in the Aizoaceae from South Africa: three new species and some new combinations. Bothalia 30: 35-42.
- --- and H. P. LINDER 1998. Systematics of Psilocaulon N.E.Br. and Caulipsolon Klak gen. nov. (Mesembryanthemoideae, Aizoaceae). Botanische Jahrbucher fur Systematik 120: 301-375.
- KLUGE, A. G. and J. WOLF. 1993. Cladistics: what's in a word? Cladistics 9: 183-199.
- LIEDE, S. 1989: Untersuchungen zum Merkmalsbestand und zur Taxonomie der ''Erepsiinae'' (Mesembryanthemaceae).Beitrage zur Biologie der Pflanzen 64: 391-479.
- MEEROW, A. W., C. L. GUY, Q.-B. LI, and S.-L. YANG. 2000. Phylogeny of the American Amaryllidaceae based on nrDNA ITS sequences. Systematic Botany 25: 708-726.
- MES, T. H. M., G. J. WIEJERS, and H. 'T HART. 1997. Phylogenetic relationhips in Monanthes (Crassulaceae) based on morphological, chloroplast and nuclear DNA variation. Journal of Evolutionary Biology 10: 193-216.
- MITCHELL, A. D. and P. B. HEENAN. 2000. Systematic relationships of New Zealand endemic Brassicaceae inferred from nrDNA ITS sequence data. Systematic Botany 25: 98-105.
- NIXON, K. C. and J. M. CARPENTER. 1996. On simultaneous analysis. Cladistics 12: 221-241.
- RAAMSDONK, L. W. D. VAN, M. P. SMIECH, and J. M. SANDBRINK. 1997. Introgression explains incongruence between nuclear and chloroplast DNA-based phylogenies in Allium section Cepa. Botanical Journal of the Linnean Society 123: 91-108.
- RAPPA, F. 1912. Per una classificazione naturale dei Mesembrianthemi. Bollettino delle reale orto botanico e giardino coloniale di Palermo 11: 21-36.
- ---. 1957. Uber die naturliche Einteilung der Mesembrianthemen. Kakteen und andere Sukkulenten 8: 8-12; 19-23.
- SAGHAI-MAROOF, M. A, K. M. SOLIMAN, R. A. JORGENSEN, and R. W. ALLARD. 1984. Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location and population dynamics. Proceedings of the National Academy of the United States 81: 8014-8018.
- SCHOLZ, A. 1985. The palynology of the upper lacustrine sediments of the Arnot pipe, Banke, Namaqualand. Annals of the South African Museum 95: 1-109.
- SCHMIEDEL, U. and N. JURGENS. 1999. Community structure on unusual islands: quartz-fields in the Succulent Karoo, South Africa. Plant Ecology 142: 57-69.
- SCHWANTES, G. 1947. System der Mesembryanthemaceen. Sukkulentenkunde 1: 34-40.
- ---. 1952. Die Fruchte der Mesembryanthemaceen. Vierteljahrsschrift der Naturforschenden Gesellschaft Zurich 97: 1- 38.
- ---. 1956. Convergencies of Mesembryanthemum. Cactus and Succulent Journal of Great Britain 18: 86-90.
- ---. 1957. Floaeering Stones and Midday Floaeers. Ernest Benn Ltd. London. ---. 1971. The Classification of the Mesembryanthemaceae. Pp. 3-6 in The Genera of the Mesembryanthemaceae, ed. H. Herre. Tafelberg, Cape Town. SIMMONS, M. P. and H. OCHOTERENA. 2000. Gaps as Characters in Sequence-Based Phylogenetic Analyses. Systematic Biology 49(2): 369-381.
- SONDER, O. W. 1862. Mesembryaceae, Lindl. Pp.386-479 In Flora Capensis 2, eds. W. H. Harvey and O. W. Sonder. Dublin, Cape Town.
- SWOFFORD, D. L. 2000. PAUP*.Phylogenetic Analysis Using Parsimony (and Other Methods). Version 4.0b4. Sinauer Associates, Sunderland, Massachusetts.
- TABERLET, P., L. GIELLY, G. PAUTOU, and J. BOUVET. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
- TANKARD, A. J. and J. ROGERS. 1978. Late Cenozoic palaeoenvironments on the west coast of Southern Africa. Journal of Biogeography 5: 319-337.
- UDOVICIC, R., G. I. MCFADDEN, P. Y. LADIGES. 1995. Phylogeny of Eucalyptus and Angophora based on 5S rDNA spacer sequence data. Molecular Phylogenetics and Evolution 4: 247-256.
- WHITE, T. J., T. BRUNS, S. LEE, and J. TAYLOR. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pp. 315-322 in PCR Protocols: A Guide to Methods and Applications, eds. M. A. Innis, D. H. Gelfand, J. J.Sninsky, and T. J.White. Academic Press, San Diego.