Planned intervention: On Wednesday April 3rd 05:30 UTC Zenodo will be unavailable for up to 2-10 minutes to perform a storage cluster upgrade.
Published March 21, 2023 | Version v1
Other Open

WORKSHOP: Make your bioinformatics workflows findable and citable

  • 1. Australian BioCommons
  • 2. Sydney Informatics Hub, University of Sydney

Description

This record includes training materials associated with the Australian BioCommons workshop ‘Make your bioinformatics workflows findable and citable’. This workshop took place on 21 March 2023.

Event description

Computational workflows are invaluable resources for research communities. They help us  standardise common analyses, collaborate with other researchers, and support reproducibility. Bioinformatics workflow developers invest significant time and expertise to create, share, and maintain these resources for the benefit of the wider community and being able to easily find and access workflows is an essential factor in their uptake by the community.

Increasingly, the research community is turning to workflow registries to find and access public workflows that can be applied to their research. Workflow registries support workflow findability and citation by providing a central repository and allowing users to search for and discover them easily.

This workshop will introduce you to workflow registries and support attendees to register their workflows on the popular workflow registry, WorkflowHub. We’ll kick off the workshop with an introduction to the concepts underlying workflow findability, how it can benefit workflow developers, and how you can make the most of workflow registries to share your computational workflows with the research community. You will then have the opportunity to register your own workflows in WorkflowHub with support from our trainers. 

Materials are shared under a Creative Commons Attribution 4.0 International agreement unless otherwise specified and were current at the time of the event.

Files and materials included in this record:

  • Event metadata (PDF): Information about the event including, description, event URL, learning objectives, prerequisites, technical requirements etc.

  • Index of training materials (PDF): List and description of all materials associated with this event including the name, format, location and a brief description of each file.

  • 2023-03-21_Workflows_slides (PDF): A copy of the slides presented during the workshop

Materials shared elsewhere:

A recording of the first part of this workshop is available on the Australian BioCommons YouTube Channel: https://youtu.be/2kGKxaPuQN8

Files

2023-03-21_Workflows_slides.pdf

Files (5.3 MB)

Name Size Download all
md5:9880f29bb6c6e422e3ddb1e1a7ce3f97
5.0 MB Preview Download
md5:d36759f92e5d7ec849390b3611867018
108.8 kB Preview Download
md5:969b2741eeba356928b8f60510411650
96.1 kB Preview Download
md5:92fb8c54e054096322f8140fb734768b
68.3 kB Preview Download

Additional details

Related works