Published March 28, 2023 | Version v1.0
Dataset Open

FIOLA: an accelerated pipeline for Fluorescence Imaging OnLine Analysis calcium dataset

Creators

  • 1. Joint Department of Biomedical Engineering UNC/NCSU,University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
  • 2. Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
  • 3. Flatiron Institute, Simons Foundation, New York, NY, USA
  • 4. Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA

Description

The dataset was used in paper FIOLA: an accelerated pipeline for Fluorescence Imaging OnLine Analysis named as 1MP. The dataset was only used to test FIOLA motion correction performance.
The dataset was collected for the paper Sensory-driven enhancement of calcium signals in individual Purkinje cell dendrites of awake mice (link: https://pubmed.ncbi.nlm.nih.gov/24582958/) but never published before. Data was recorded in the left lobule of the cerebellum of an awake mouse using the calcium indicator GCaMP6f. GCaMP6f was selectively expressed in Purkinje cells via a combinatorial virus strategy (as explained in the paper).

For other datasets used in paper FIOLA, check the original paper and sources they were published.

 

 

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