Published March 28, 2023
| Version V1
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Genomic surveillance of SARS-CoV-2 in healthcare workers: a critical sentinel group for monitoring the SARS-CoV-2 variant shift
Creators
- Dayane Azevedo Padilha1
- Doris Sobral Marques Souza1
- Eric Kazuo Kawagoe1
- Vilmar Benetti Filho1
- Ariane Nicaretta Amorim1
- Fernando Hartmann Barazzetti1
- Marcos André Schörner1
- Sandra Bianchini Fernandes2
- Bruna Kellet Coelho2
- Darcita Buerger Rovaris2
- Marlei Pickler Debiase dos Anjos2
- Juliana Righetto Moser3
- Fernanda Rosene Melo3
- Bianca Bittencourt de Souza3
- Dimitri da Costa Bessa3
- Fernando Henrique de Paula e Silva Mendes3
- Alexandra Crispim Boing1
- Antonio Fernando Boing1
- Josimari Telino de Lacerda1
- Guilherme Valle Moura1
- Daniela Carolina De Bastiani4
- Milene Höehr de Moraes4
- Luiz Felipe Valter de Oliveira4
- Renato Simões Moreira5
- Patricia Hermes Stoco1
- Maria Luiza Bazzo1
- Gislaine Fongaro1
- Glauber Wagner1
- 1. Universidade Federal de Santa Catarina
- 2. Laboratório Central do Estado da Saúde de Santa Catarina
- 3. Diretoria de Vigilância Epidemiológica de Santa Catarina
- 4. Biome-Hub Pesquisa e Desenvolvimento
- 5. Instituto Federal de Santa Catarina
Description
Figure S1. Phylogenetic reconstruction of SARS-CoV-2 sequences distinguished between general population and healthcare workers. Samples correspond to the period of November 17th, 2021 and February 21st, 2022. The phylogenetic tree was reconstructed with 1,000 iterations for Ultra-Fast Bootstrap and SH-like approximate likelihood ratio test (SH-aLRT). Reference (SARS-CoV-2 reference genome - NC_045512).