Published March 11, 2022
| Version v5
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3D UNet Lateral Root Primordia Cells
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Description
UNet3D Lateral Root Primordia Cell Boundries
A a variant of 3D U-Net trained to predict the cell boundaries in lightsheet stacks of Arabidopsis lateral root primordia. Voxel size: (0.25x0.1625x0.1625µm^3) (ZYX).
Trained on 3D lightsheet image stacks published here.
Notes
A 3D U-Net trained to predict the cell boundaries in lightsheet stacks of Arabidopsis Lateral Root Primordia. (0.25x0.1625x0.1625) microns ZYX (Uploaded via https://bioimage.io)
Files
pred.png
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Additional details
Related works
- Has part
- Figure: https://zenodo.org/record/6346524/files/raw.png (URL)
- Figure: https://zenodo.org/record/6346524/files/pred.png (URL)
- Is compiled by
- Other: https://zenodo.org/record/6346524/files/rdf.yaml (URL)
- Is documented by
- Technical note: https://zenodo.org/record/6346524/files/unet3d.md (URL)
- References
- Other: https://bioimage.io/#/r/imjoy%2FBioImageIO-Packager (URL)