PerCon SFA Snekmer KBase Narrative App

The Snekmer KBase App is an extension toolkit that allows for running supervised modeling and unsupervised clustering from protein family scores and/or searching unknown sequences for protein families using the Snekmer workflow within the KBase narrative user interface.

• KBase Narrative Information: Snekmer Catalog Status (Running v2.2.4 of the Catalog Server)
• Narrative App Methods:
  • Run Snekmer Search
  • Run Snekmer Model

_{Federal Acknowledgements}

_{This research was supported in part by the U.S. Department of Energy (DOE), Office of Biological and Environmental Research (BER), as part of the Genomic Science Program (GSP) as a contribution of the Pacific Northwest National Laboratory (PNNL) Secure Biosystems Design Science Focus Area: Persistence Control of Engineered Functions in Complex Soil Microbiomes (PerCon SFA). Pacific Northwest National Laboratory (PNNL) is a multiprogram national laboratory managed by the Battelle Memorial Institute Battelle Memorial Institute, operating under the U.S. Department of Energy, Contract DE-AC05-76RL01830.}