Published February 2, 2023 | Version v1
Dataset Open

CRISPR/Cas9 knock-out sgRNA sequencing in human CaCo2 cells

  • 1. Innsbruck Medical University

Description

The data was obtained in course of performing a CRISPR/Cas9 knock-out in human polarized epithelial cells (CaCo2). The screen aimed to identify genes relevant for proper epithelial polarization and correct apical transport of the apical transmembrane protein dipeptidyl-peptidase 4. It includes next-generation-sequencing data (raw sgRNA-read-counts) of two experimental (sorted) and corresponding control (ctrl) cell populations. It further contains sequence information on the sgRNAs as represented in the human GeCKOv2-CRISPR library and the corresponding targeted genes.

Notes

Funding provided by: Austrian Science Fund
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100002428
Award Number:

Funding provided by: Oesterreichische Nationalbank
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100004061
Award Number:

Funding provided by: Österreichischen Akademie der Wissenschaften
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100001822
Award Number:

Files

README_file.txt

Files (7.0 MB)

Name Size Download all
md5:79ef60385f6064086b6919f2e688844d
4.1 kB Preview Download
md5:e871064c6fc63982a652e6499eaefc8d
7.0 MB Download

Additional details

Related works

Is cited by
10.7554/eLife.80135 (DOI)