Published December 31, 2022 | Version v1
Dataset Open

Phylogenetic signal of sub-arctic beetle communities

  • 1. University of Guelph

Description

Post-glacial dispersal and colonization processes have shaped community patterns in sub-Arctic regions such as Churchill, Manitoba, Canada. This study investigates evolutionary community structure within the beetle (Coleoptera) families of Churchill and tests whether biological traits have played a role in governing colonization patterns from refugial and southerly geographic regions. This study quantifies sub-Arctic beetle phylogenetic community structure for each family using the net relatedness index (NRI) and nearest taxon index (NTI), calculated using publicly available data from the Barcode of Life Data Systems (BOLD); compares patterns across families with different traits (habitat, diet) using standard statistical analysis (ANOVA) as well as phylogenetic generalized least squares (PGLS) using a family-level beetle phylogeny obtained from the literature; and compares community structure in Churchill with a region in southern Canada (Guelph, Ontario). These analyses were also repeated at a genus level. The dominant pattern detected in our study was that aquatic families were much better represented in Churchill compared to terrestrial families, when compared against richness sampled from across Canada and Alaska. Individually, most families showed significant phylogenetic clustering in Churchill, likely due to the strong environmental filtering present in Arctic environments. There was no significant difference in phylogenetic structure between Churchill and Guelph but with a trend towards stronger clustering in the North. Fungivores were significantly more overdispersed than other feeding modes, predators were significantly more clustered, and aquatic families showed significantly stronger clustering compared to terrestrial. This study contributes to our understanding of the traits and processes structuring insect biodiversity and macroecological trends in the sub-Arctic.

Notes

All information needed for reuse of this dataset, as well as additonal files, is avaliable at github.com/S-Majoros/Phylogenetic_Community_Structure_Code.r. For character matrices: the Churchill family matrices are Coleoptera_Matrix_NRI.csv and Coleoptera_Matrix_NTI.csv, the Churchill genus matrices are Genus_NRI_Matrix_Churchill.csv and Genus_NTI_Matrix_Churchill.csv, the Guelph family matrices are Guelph_Matrix_NRI.csv and Guelph_Matrix_NTI.csv, and the Guelph genus matrices are Guelph_Genus_Matrix_NRI.csv and Guelph_Genus_Matrix_NTI.csv. For the phylogenetic trees, the Churchill family tree is Coleoptera_Tree_2020, the Churchill genus tree is Churchill_Genus_Tree, the Guelph family tree is Guelph_Tree_2, and the Guelph genus tree is GGTree. 

Funding provided by: Natural Sciences and Engineering Research Council of Canada
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100000038
Award Number: USRA

Funding provided by: Natural Sciences and Engineering Research Council of Canada
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100000038
Award Number: Discovery Grant

Funding provided by: Government of Canada through Genome Canada and Ontario Genomics *
Crossref Funder Registry ID:
Award Number: Grant in Bioinformatics and Computational Biology

Funding provided by: Ontario Ministry of Economic Development, Job Creation and Trade
Crossref Funder Registry ID: http://dx.doi.org/10.13039/501100013569
Award Number: Grant in Bioinformatics and Computational Biology

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