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Published December 14, 2022 | Version v1
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BurstDECONV, artificial datasets

  • 1. University of Montpellier
  • 2. CNRS

Description

Artificial dataset used in the paper BurstDECONV: A signal deconvolution method to uncover mechanisms of transcriptional bursting in live cells.

BurstDECONV is an innovative inference method that deconvolves live cell transcription imaging data to reconstruct each polymerase initiation event.

The dataset simulates live transcription imaging data for 2 states and 3 states promoters with various switching rate parameters.

We also provide the code used for testing the robustness of the BurstDECONV pipeline with respect to noise, experimental artifacts and suboptimal experimental conditions.

Files

artificial_data.zip

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