Genetic Features of the Marine Polychaete Sirsoe methanicola from Metagenomic Data

WebAUGUSTUS input and output data used in for eukaryotic gene prediction in Sirsoe methanicola:

WebAUGUSTUS input data:

1. capitella.fa - Nucleotide genomic sequence of Capitella teleta (NCBI accession: GCA_000328365.1)
2. capitella-protein.faa - Protein sequences in the Capitella teleta genome (NCBI accession: GCA_000328365.1)
3. big-contigs-wrapped.fa - Contigs >= 3,000 bp long assembled from the S. methanicola metagenomes (NCBI BioProject ID PRJNA689840) that did not bin into any bacterial MAGs
4. small-contigs-wrapped.fa - Contigs< 3,000 bp long assembled from the S. methanicola metagenomes (NCBI BioProject ID PRJNA689840) that did not bin into any bacterial MAGs

WebAUGUSTUS output data:

1. augustus.bigcontigs.gff - WebAUGUSTUS GFF output file for contigs >=3,000 bp
2. augustus.smallcontigs.gff - WebAUGUSTUS GFF output file for contigs <3,000 bp
3. augustus.all.faa - All protein sequences predicted from the S. methanicola metagenomes using WebAUGUSTUS