Published November 11, 2022
| Version v1
Dataset
Open
Catalog of metagenome-assembled bacterial genomes from Antarctic endolithic communities
Description
The dataset consists of 2 rar archives and 2 files ( tab-separated values ). Here is a brief summary of their contents:
- MAGs_taxonomy: GTDB classification for each MAG.
- MAGs_genome_info: genome size, completeness, contamination, length, N50.
- MAGs - candidate species: high quality (HQ) and medium quality (MQ) bacterial metagenome assembled genomes.
- MAGs_Annotation: EggNOG annotation files. For each MAG, the following files are included:
- eggnog.emapper.annotations: the final EggNOG annotation;
- eggnog.emapper.hmm_hits: list of significant hits to eggNOG Orthologous Groups
- eggnog.emapper.seed_orthologs: best match of each query within the best Orthologous Group (OG) reported in the eggnog.emapper.hmm_hits file.
Files
Files
(5.1 GB)
| Name | Size | Download all |
|---|---|---|
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md5:365db2ec42b314f9a57a60b6a0d2725b
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2.6 GB | Download |
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md5:9f200c11cc390b467dc48a440a63d9d1
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2.4 GB | Download |
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md5:7e118fe91813d33cae3c57fda8bd70a5
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587.2 kB | Download |
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md5:1b8625ae0f71836041560080c9a02f79
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1.7 MB | Download |
Additional details
References
- Albanese, D., Coleine, C., Rota-Stabelli, O., Onofri, S., Tringe, S. G., Stajich, J. E., ... & Donati, C. (2021). Microbiome, 9(1), 1-15.
- Coleine, C., Albanese, D., Onofri, S., Tringe, S. G., Pennacchio, C., Donati, C., ... & Selbmann, L. (2020). Microbiology resource announcements, 9(10), e01599-19.