Published November 8, 2022
| Version v1
Journal article
Restricted
Evaluating the taxonomy of macrofossils used in macroevolution: a case study of Artemisia (Asteraceae)
Creators
- 1. State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, 20 Nanxincun Xiangshan, Beijing 100093, China. & University of Chinese Academy of Sciences, Beijing 100049, China. & jiaobh@ibcas.ac.cn; https://orcid.org/0000-0001-7621-3676
- 2. State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, 20 Nanxincun Xiangshan, Beijing 100093, China. & University of Chinese Academy of Sciences, Beijing 100049, China. & lulili@ibcas.ac.cn; https://orcid.org/0000-0002-9766-4510
- 3. State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, 20 Nanxincun Xiangshan, Beijing 100093, China. & University of Chinese Academy of Sciences, Beijing 100049, China.
- 4. National Resource Center for Chinese Meteria Medica, Chinese Academy of Chinese Medical Sciences, 100700, Beijing, China & Y_yuan0732@163.com; https://orcid.org/0000-0002-1234-6813
- 5. State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, 20 Nanxincun Xiangshan, Beijing 100093, China. & University of Chinese Academy of Sciences, Beijing 100049, China. & wangyf@ibcas.ac.cn; https://orcid.org/0000-0002-4530-2630
- 6. State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, 20 Nanxincun Xiangshan, Beijing 100093, China. & University of Chinese Academy of Sciences, Beijing 100049, China. & Gaotg@ibcas.ac.cn; https://orcid.org/0000-0001-8702-9647
Description
Jiao, Bo-Han, Lu, Li-Li, Chen, Chen, Wei, Meng, Shen, Jia-Hao, Yuan, Yuan, Wang, Yu-Fei, Gao, Tian-Gang (2022): Evaluating the taxonomy of macrofossils used in macroevolution: a case study of Artemisia (Asteraceae). Phytotaxa 572 (1): 107-114, DOI: 10.11646/phytotaxa.572.1.8, URL: http://dx.doi.org/10.11646/phytotaxa.572.1.8
Files
Linked records
Additional details
Identifiers
- LSID
- urn:lsid:plazi.org:pub:6A7DFFF57726FF8BFFDEFFEC166C4B33
References
- Barreda, V.D., Palazzesi, L., Telleria, M.C., Katinas, L., Crisci, J.V., Bremer, K., Passalia, M.G, Corsolini, R, Rodriguez Brizuela, R. & Bechis, F. (2010) Eocene Patagonia fossils of the daisy family. Science 329 (5999): 1621. https://doi.org/10.1126/science.1193108
- Bremer, K. & Humphries, C. (1993) Generic monograph of the Asteraceae-Anthemideae. Bulletin of the Natural History Museum 23: 1-177.
- Chen, S.B. & Zhang, J.T. (1991) A Study on Pollen Morphology of Some Chinese Genera in Tribe Anthemideae. Journal of Systematics and Evolution 29 (3): 246-251.
- Crepet, W.L. & Stuessy, T.F. (1978) A reinvestigation of the fossil Viguiera cronquistii (Compositae). Brittonia 30: 483-491. https://doi.org/10.2307/2806356
- Donoghue, M.J., Doyle, J.A., Gauthier, J., Kluge, A.G. & Rowe, T. (1989) The importance of fossils in phylogeny reconstruction. Annual Review of Ecology, Evolution, and Systematics 20: 431-460. https://doi.org/10.1146/annurev.es.20.110189.002243
- Dos Reis, M. & Yang, Z. (2011)Approximate likelihood calculation on a phylogeny for Bayesian estimation of divergence times. Molecular Biology and Evolution 28: 2161-2172. https://doi.org/10.1093/molbev/msr045
- Graham, A. (1996) A contribution to the geologic history of the Compositae. In: Hind, D.N.N. & Beentje, H. (Eds.) Proceedings of the International Compositae Conference, Kew, 1994, vol. 1, Compositae: Systematics. Royal Botanical Gardens, Kew, pp. 123-140.
- Hayat, M.Q., Ashraf, M., Khan, M.A., Yasmin, G., Shaheen, N. & Jabeen, S. (2009) Phylogenetic analysis of Artemisia L. (Asteraceae) based on micromorphological traits of pollen grains. African Journal of Biotechnology 8: 6561-6568.
- Hermsen, E.J. & Hendricks, J.R. (2008) W(h)ither Fossils? Studying Morphological Character Evolution in the Age of Molecular Sequences. Annals of the Missouri Botanical Garden 95 (1): 72-100. https://doi.org/10.3417/2006206
- Iles, W.J.D., Smith, S.Y., Gandolfo, M.A. & Graham, S.W. (2015) Monocot fossils suitable for molecular dating analyses. Botanical Journal of the Linnean Society 178 (3): 346-374. https://doi.org/10.1111/boj.12233
- Jiang, L., Wang, Q., Ye, L.Z. & Ling, Y.R. (2005) Pollen morphology of Artemisia L. and its systematic significance. Wuhan University Journal of Natural Sciences 10: 448-454. https://doi.org/10.1007/BF02830685
- Landis, M.J., Eaton, D.A.R., Clement, W.L., Park, B., Spriggs, E.L., Sweeney, P.W., Edwards, E.J. & Donoghue, M.J. (2020) Joint phylogenetic estimation of geographic movements and biome shifts during the global diversification of Viburnum. Systematic Biology 70: 67-85. https://doi.org/10.1093/sysbio/syaa027
- Ling, Y.R., Humphries, C.J. & Gilbert, M.G. (2011) Artemisia Linnaeus. In: Wu, Z.Y., Raven, P.H. & Hing, D.Y. (Eds.) Flora of China, vol. 20. Science Press, Beijing & Missouri Botanical Garden Press, Saint-Louis, pp. 1151-1259.
- Linnaeus, C. (1754) Genera Plantarum. L. Salvius, Stockholm, 1200 pp.
- Linnaeus, C. (1767) Systerna Naturae, vol. 2. Salvius, Stockholm.
- Malik, S., Vitales, D., Hayat, M., Korobkov, A., Garnatje, T. & Valles, J. (2017) Phylogeny and biogeography of Artemisia subgenus Seriphidium (Asteraceae: Anthemideae). Taxon 66: 934-952. https://doi.org/10.12705/664.8
- Martin, J., Torrell, M. & Valles, J. (2001) Palynological features as a systematic marker in Artemisia L. and related genera (Asteraceae, Anthemideae). Plant Biology 3 (4): 372-378. https://doi.org/10.1055/s-2001-16462
- Martin, J., Torrell, M., Korobkov, A.A. & Valles, J. (2003) Palynological features as a systematic marker in Artemisia L. and related genera (Asteraceae, Anthemideae) - II: Implications for subtribe Artemisiinae delimitation. Plant Biology 5 (1): 85-93. https://doi.org/10.1055/s-2003-37979
- Matsunaga, K.K.S. & Smith, S.Y. (2021) Fossil palm reading: using fruits to reveal the deep roots of palm diversity. American Journal of Botany 108: 472-494. https://doi.org/10.1002/ajb2.1616
- Mei, Q., Chen, X., Xiang, L., Liu, Y., Su, Y., Gao, Y., Dai, W., Dong, P. & Chen, S. (2016) DNA Barcode for Identifying Folium Artemisiae argyi from Counterfeits. Biological and Pharmaceutical Bulletin 39 (9): 1531-1537. https://doi.org/10.1248/bpb.b16-00336
- Miao, Y., Meng, Q., Fang, X., Yan, X., Wu, F. & Song, C. (2011) Origin and development of Artemisia (Asteraceae) in Asia and its implications for the uplift history of the Tibetan Plateau: A review. Quaternary International 236: 3-12. https://doi.org/10.1016/j.quaint.2010.08.014
- Oberprieler, C., Himmelreich, S., Kallersjo, M., Valles, J., Watson, L.E. & Vogt, R. (2009) Anthemideae. In: Funk, V.A., Susanna, A., Stuessy, T.F. & Bayer, R.J. (Eds.) Systematics, Evolution and Biogeography of the Compositae. International Association Plant Taxonomy, Vienna. pp. 632-666.
- Parham, J.F., Donoghue, P.C.J., Bell, C.J., Calway, T.D., Head, J.J., Holroyd, P.A., Inoue, J.G., Irmis, R.B., Joyce, W.G., Ksepka, D.T., Patane, J.S.L., Smith, N.D., Tarver, J.E., Van Tuinen, M., Yang, Z., Angielczyk, K.D., Greenwood, J., Hipsley, C.A., Jacobs, L., Makovicky, P.J., Muller, J., Krister, T.S., Jessica, M.T., Rachel, C.M.W. & Michael, J.B. (2012) Best practices for justifying fossil calibrations. Systematic Biology 61 (2): 346-359. https://doi.org/10.1093/sysbio/syr107
- Sanderson, M.J. (2003) r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock. Bioinformatics 19: 301-302. https://doi.org/10.1093/bioinformatics/19.2.301
- Sanz, M., Vilatersana, R., Hidalgo, O., Garcia-Jacas, N., Susanna, A., Schneeweiss, G. & Valles, J. (2008) Molecular phylogeny and evolution of floral characters of Artemisia and allies (Anthemideae, Asteraceae): Evidence from nrDNA ETS and ITS sequences. Taxon 57: 1-13.
- Sauquet, H., Ho, S.Y.W., Gandolfo, M.A., Jordan, G.J., Wilf, P., Cantrill, D.J., Bayly, M.J., Bromham, L., Brown, G.K., Carpenter, R.J., Lee, D.M., Murphy, D.J., Sniderman, J.M.K. & Udovicic, F. (2012) Testing the impact of calibration on molecular divergence times using a fossil-rich group: the case of Nothofagus (Fagales). Systematic Biology 61: 289-313. https://doi.org/10.1093/sysbio/syr116
- Sauquet, H. & Magallon, S. (2018) Key questions and challenges in angiosperm macroevolution. New Phytologist 219 (4): 1170-1187. https://doi.org/10.1111/nph.15104
- Shultz, L.M. (2006) Genus Artemisia (Asteraceae: Anthemideae). In: Flora of North America Editorial Committee (Ed.) The Flora of North America north of Mexico, vol. 19: Asterales. Oxford University Press, New York, pp. 503-534.
- Smith, S.Y. (2013) The fossil record of non-commelinid monocots. In: Wilkin, P. & Mayo, S.J. (Eds.) Early events in monocot evolution. Cambridge University Press, Cambridge, pp. 29-59. https://doi.org/10.1017/CBO9781139002950.003
- Tkach, N.V., Hoffmann, M.H., Roser, M. & von Hagen, K.B. (2008) Temporal patterns of evolution in the Arctic explored in Artemisia L. (Asteraceae) lineages of different age. Plant Ecology & Diversity 1: 161-169. https://doi.org/10.1080/17550870802331912
- Tomescu, A.M.F. & Rothwell, G.W. (2022) Fossils and plant evolution: structural fingerprints and modularity in the evo-devo paradigm. EvoDevo 13: 8. https://doi.org/10.1186/s13227-022-00192-7
- Valles, J., Garcia, S., Hidalgo, O., Martin, J., Pellicer, J., Sanz, M. & Garnatje, T. (2011) Biology, genome evolution, biotechnological issues, and research including applied perspectives in Artemisia (Asteraceae). Advances in Botanical Research 60: 349-419.
- Wood, H.M., Matzke, N.J., Gillespie, R.G. & Griswold, C.E. (2013) Treating fossils as terminal taxa in divergence time estimation reveals ancient vicariance patterns in the palpimanoid spiders. Systematic Biology 62: 264-284. https://doi.org/10.1093/sysbio/sys092
- Yang, Z. & Rannala, B. (2006) Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds. Molecular Biology and Evolution 23: 212-226. https://doi.org/10.1093/molbev/msj024
- Zazula, G.D., Froese, D.G., Schweger, R.W., Mathewes, A.B., Beaudoin, A.M., Telka, C.R. & Harington, J.A. (2003) Westgate Palaeobotany: ice-age steppe vegetation in east Beringia. Nature 423. https://doi.org/10.1038/423603a
- Zazula, G.D., Froese, D.G., Elias, S.A., Kuzmina, S. & Mathewes, R.W. (2007) Arctic ground squirrels of the mammoth-steppe: paleoecology of middens from the last glaciation, Yukon Territory, Canada. Quaternary Science Reviews 26: 979-1003. https://doi.org/10.1016/j.quascirev.2006.12.006
- Zhang, C., Huang, C.H., Liu, M., Hu, Y., Panero, J.L., Luebert, F., Gao, T. & Ma, H. (2021) Phylotranscriptomic insights into Asteraceae diversity, polyploidy, and morphological innovation. Journal of Integrative Plant Biology 63 (7): 1273-1293. https://doi.org/10.1111/jipb.13078