Published November 5, 2022 | Version v1
Dataset Open

single-cell RNAseq data (data set 17) in the publication scFASTCORMICS: A contextualization algorithm to reconstruct metabolic multi-cell population models from single-cell RNAseq data

Description

The present dataset (dataset17 was used as input to build scFASTCORMICS models. The files correspond to the clusters identified by Seurat in the single-cell data from PBMC metastatic MCC samples downloaded from the GEO website (GSE117988)

see the protocol: scFASTCORMICS: A contextualization algorithm to reconstruct metabolic multi-cell population models from single-cell RNAseq data

and github: https://github.com/sysbiolux/scFASTCORMICS

For more information, version updates of the scFASTCORMICS. 

Files

scdata_cluster_0.txt

Files (399.1 MB)

Name Size Download all
md5:257fd7d8bed997eead3a4a4890fe1cf0
72.0 MB Preview Download
md5:6dafdc6cfd23735fa34268078781af3a
70.4 MB Preview Download
md5:08f2bf2c168f5e8f2ea2cb3a3d2db9aa
2.7 MB Preview Download
md5:ed842a64f144690cde04bb805c27b7c9
1.9 MB Preview Download
md5:5358444ee93719dd6b61e8be9bb138f2
1.4 MB Preview Download
md5:07710de3a8a919396b0a4d81b4d430c4
64.7 MB Preview Download
md5:5eea6d0df227f92cbbc65deb11528b26
64.3 MB Preview Download
md5:12cd9570dbdb24644d0b718cd5f0c1c8
59.6 MB Preview Download
md5:a12057728578e72af9a5597e2f4f2b1f
25.0 MB Preview Download
md5:8fba5259f9f85e657efd9a524b6771ff
14.5 MB Preview Download
md5:5fa7342b50d7fb73e695c4e649817689
11.5 MB Preview Download
md5:7091edd1777a4c9a0b675491d81aa27f
5.1 MB Preview Download
md5:9dc74e8960a615462c538ab5992e1786
5.8 MB Preview Download