Multiplexed direct detection of barcoded protein reporters on a nanopore array
Creators
- 1. University of Washington
- 2. Microsoft Research
Description
This is the train/test nanopore data for NanoporeTER classification directly from nanopore raw signal data (see Cardozo et al. Multiplexed direct detection of barcoded protein reporters on a nanopore array. Nat Biotechnol. 2022 Jan;40(1):42-46)
Each row in the file "Y00_Y08_set1set2set3_MinIONNoise_LBNoise_EcoliNoise_raw20000_05132019.npy" is an extracted NanoporeTER capture event (or "read") of ~2000 observations in length. The file named "Y00_Y08_set1set2set3_MinIONNoise_LBNoise_EcoliNoise_raw20000_05132019_classes.npy" contains the labels associated with each of the rows of the "Y00_Y08_set1set2set3_MinIONNoise_LBNoise_EcoliNoise_raw20000_05132019.npy" file.
The Label:NTER-Barcode map is:
0:Y00
1:Y01
2:Y02
3:Y03
4:Y04
5:Y05
6:Y06
7:Y07
8:Y08
9:Noise
Files
Files
(24.5 GB)
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md5:677f532e27de434fa248ed44a73f679e
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24.5 GB | Download |
md5:ceb8c205de7e4f1ba8266a2eebeb55f2
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1.2 MB | Download |