Published September 26, 2022 | Version v1
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Ice Age effects on genetic divergence of the American crocodile (Crocodylus acutus) in Panama: reconstructing limits of gene flow and environmental ranges: A reply to O'Dea et al

  • 1. McGill University

Description

R Code to explore the bioclimatic profile of the species we used point observations and extracted the values of the 8 bioclimatic variables from WorldClim 2 (Fick and Hijmans, 2017)  and of each locality, at a resolution of 30 arc seconds  and PaleoClim (Brown et al. 2018) with a resolution of 2.5 arc seconds. We used R V.3.6.1 (R Core Team, 2021) and the packages DISMO V.1.3 (Hijmans et al. 2020) and MAPTOOLS V.1.2 (Bivan & Lewin-Kohn,2021).

 

Bivand R. and Nicholas Lewin-Koh (2021). maptools: Tools for Handling Spatial Objects. R package version 1.1-2. https://CRAN.R-project.org/package=maptools

Fick, S.E. and Hijmans, R.J. 2017. WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas. Int. J. Climatol, 37: 4302-4315. https://doi.org/10.1002/joc.5086

Hijmans, R.S., S. Phillips, J. Leathwick and J. Elith (2020). dismo: Species Distribution Modeling. R package version 1.3-3. https://CRAN.R-project.org/package=dismo

R Core Team. 2021. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. URL https://www.R-project.org/.

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