Published September 16, 2022
| Version 1.1
Dataset
Open
geNomad database
Description
Marker database used by geNomad for virus and plasmid identification.
- genomad_db_v1.1.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's VMR number 19.
- genomad_hmm_v1.1.tar.gz: HMMER HMM models.
- genomad_metadata_v1.1.tsv.gz: Metadata for all the 227,897 markers.
- genomad_msa_v1.1.tar.gz: Multiple sequence alignments in FASTA format.
Files
Files
(4.9 GB)
| Name | Size | Download all |
|---|---|---|
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md5:27b11e0f086aaa9b1faadf006787fbb4
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726.9 MB | Download |
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md5:6866e78b886fb6e3db8e618875f0fd0c
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3.5 GB | Download |
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md5:01879a1889a16273ab097b4a2a516819
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6.9 MB | Download |
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md5:c785402022776943e589c4ab6e8d889f
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685.7 MB | Download |